GD24004 (Drosophila simulans)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0195364 T116401_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.818 0.991
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.759 0.841
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.759 0.841
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.759 0.841
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.759 0.841
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.757 0.814
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.757 0.814
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.757 0.814
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.757 0.814
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.757 0.814
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.757 0.814
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.757 0.814
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.757 0.814
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.757 0.814
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.757 0.814
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.757 0.814
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.757 0.814
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0222406 C2H2 ZF 306 328
FBpp0222406 C2H2 ZF 341 363
FBpp0222406 C2H2 ZF 367 389
FBpp0222406 C2H2 ZF 395 417
FBpp0222406 C2H2 ZF 423 443

Links

Other C2H2 ZF family TFs
Other Drosophila simulans TFs

112 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30128.m008552 Ricinus communis 30128.m008552 I
Aquca_043_00021 Aquilegia coerulea Aquca_043_00021 I
ASR3 Arabidopsis thaliana AT2G33550 D
Bo4g043600 Brassica oleracea Bo4g043600 I
Bo4g182020 Brassica oleracea Bo4g182020 I
Bostr.23794s0746 Boechera stricta Bostr.23794s0746 I
Bra005486 Brassica rapa Bra005486 I
Bra021860 Brassica rapa Bra021860 I
Carubv10023675m.g Capsella rubella Carubv10023675m.g I
cassava12909.valid.m1 Manihot esculenta cassava12909.valid.m1 I
cassava13649.valid.m1 Manihot esculenta cassava13649.valid.m1 I
chr1.LjT14I13.140.nd Lotus japonicus chr1.LjT14I13.140.nd I
Ciclev10005329m.g Citrus clementina Ciclev10005329m.g I
Cla001502 Citrullus lanatus Cla001502 I
Cucsa.349220 Cucumis sativus Cucsa.349220 I
Eucgr.B03553 Eucalyptus grandis Eucgr.B03553 I
evm.TU.supercontig_2461.1 Carica papaya evm.TU.supercontig_2461.1 I
GLYMA08G28880 Glycine max GLYMA08G28880 I
GLYMA18G51790 Glycine max GLYMA18G51790 I
Gorai.002G021600 Gossypium raimondii Gorai.002G021600 I
MDP0000232058 Malus domestica MDP0000232058 I
mgf009760m Mimulus guttatus mgf009760m I
orange1.1g019057m.g Citrus sinensis orange1.1g019057m.g I
PK25885.1 Cannabis sativa PK25885.1 I
POPTR_0001s13060 Populus trichocarpa POPTR_0001s13060 I
POPTR_0003s16150 Populus trichocarpa POPTR_0003s16150 I
SapurV1A.0499s0110 Salix purpurea SapurV1A.0499s0110 I
SapurV1A.2674s0010 Salix purpurea SapurV1A.2674s0010 I
scaffold_401930.1 Arabidopsis lyrata scaffold_401930.1 I
Solyc04g045430.2 Solanum lycopersicum Solyc04g045430.2 I
Thhalv10016974m.g Eutrema salsugineum Thhalv10016974m.g I
VIT_01s0150g00050 Vitis vinifera VIT_01s0150g00050 I