CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GE18524
(
Drosophila yakuba
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
FBgn0235935
T117012_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
FBpp0263534
C2H2 ZF
329
351
HRCKYCGKIFGSYSALQIHLRSH
FBpp0263534
C2H2 ZF
357
379
FVCNVCGSKFTTKGNLKVHYQRH
FBpp0263534
C2H2 ZF
615
637
FRCKICGRAFATKGNLKAHMSIH
FBpp0263534
C2H2 ZF
647
669
FKCPVCHQKFSNGIILQQHIRIH
FBpp0263534
C2H2 ZF
1053
1075
HFCHVCRRNFSSSSALQIHMRTH
FBpp0263534
C2H2 ZF
1081
1103
FQCNVCQKAFTTKGNLKVHMGTH
Links
Other
C2H2 ZF
family TFs
Other
Drosophila yakuba
TFs
11 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
AMTR_s00052p00202630
Amborella trichopoda
AMTR_s00052p00202630
I
Aquca_027_00077
Aquilegia coerulea
Aquca_027_00077
I
S1FA1
Arabidopsis thaliana
AT3G53370
I
BGIOSGA015142
Oryza indica
BGIOSGA015142
N
BGIOSGA015145
Oryza indica
BGIOSGA015145
N
Bo6g067310
Brassica oleracea
Bo6g067310
I
Bra003132
Brassica rapa
Bra003132
I
BRADI5G09140
Brachypodium distachyon
BRADI5G09140
N
Cagra.0612s0062
Capsella grandiflora
Cagra.0612s0062
I
Carubv10018341m.g
Capsella rubella
Carubv10018341m.g
I
cassava45931.m1
Manihot esculenta
cassava45931.m1
I
chr1.CM0033.550.nc
Lotus japonicus
chr1.CM0033.550.nc
I
Ciclev10013218m.g
Citrus clementina
Ciclev10013218m.g
I
Cla018106
Citrullus lanatus
Cla018106
I
Cla018556
Citrullus lanatus
Cla018556
I
Cucsa.124240
Cucumis sativus
Cucsa.124240
I
Cucsa.307040
Cucumis sativus
Cucsa.307040
I
Eucgr.A01168
Eucalyptus grandis
Eucgr.A01168
I
evm.TU.supercontig_638.2
Carica papaya
evm.TU.supercontig_638.2
I
fgenesh1_pm.C_scaffold_5001425
Arabidopsis lyrata
fgenesh1_pm.C_scaffold_5001425
I
gene09647-v1.0-hybrid
Fragaria vesca
gene09647-v1.0-hybrid
N
GLYMA03G33640
Glycine max
GLYMA03G33640
I
GLYMA10G05790
Glycine max
GLYMA10G05790
I
GLYMA13G20160
Glycine max
GLYMA13G20160
I
GLYMA19G36350
Glycine max
GLYMA19G36350
I
Gorai.002G249300
Gossypium raimondii
Gorai.002G249300
I
Gorai.006G168100
Gossypium raimondii
Gorai.006G168100
I
Gorai.009G419300
Gossypium raimondii
Gorai.009G419300
I
GRMZM2G056929
Zea mays
GRMZM2G056929
N
GRMZM2G147424
Zea mays
GRMZM2G147424
N
GSMUA_Achr10G13120_001
Musa acuminata
GSMUA_Achr10G13120_001
I
GSMUA_Achr3G17900_001
Musa acuminata
GSMUA_Achr3G17900_001
N
GSMUA_Achr6G23400_001
Musa acuminata
GSMUA_Achr6G23400_001
N
LPERR04G08400
Leersia perrieri
LPERR04G08400
N
LPERR04G08410
Leersia perrieri
LPERR04G08410
I
Lus10015073.g
Linum usitatissimum
Lus10015073.g
I
Lus10023177.g
Linum usitatissimum
Lus10023177.g
I
MDP0000276000
Malus domestica
MDP0000276000
N
mgf000337m
Mimulus guttatus
mgf000337m
I
MLOC_67411
Hordeum vulgare
MLOC_67411
N
MTR_7g100905
Medicago truncatula
MTR_7g100905
I
OB04G18770
Oryza brachyantha
OB04G18770
I
OB04G18780
Oryza brachyantha
OB04G18780
I
OBART04G11650
Oryza barthii
OBART04G11650
N
OBART04G11660
Oryza barthii
OBART04G11660
N
OGLUM04G11330
Oryza glumaepatula
OGLUM04G11330
N
OGLUM04G11340
Oryza glumaepatula
OGLUM04G11340
N
OMERI04G10270
Oryza meridionalis
OMERI04G10270
N
OMERI04G10280
Oryza meridionalis
OMERI04G10280
N
ONIVA04G09610
Oryza nivara
ONIVA04G09610
N
ONIVA04G09620
Oryza nivara
ONIVA04G09620
N
OPUNC04G09650
Oryza punctata
OPUNC04G09650
I
OPUNC04G09660
Oryza punctata
OPUNC04G09660
N
orange1.1g044991m.g
Citrus sinensis
orange1.1g044991m.g
I
ORGLA04G0086600
Oryza glaberrima
ORGLA04G0086600
N
ORGLA04G0086800
Oryza glaberrima
ORGLA04G0086800
N
ORUFI04G12840
Oryza rufipogon
ORUFI04G12840
N
ORUFI04G12850
Oryza rufipogon
ORUFI04G12850
N
S1FA2
Oryza sativa
OS04G0408700
N
OS04G0408900
Oryza sativa
OS04G0408900
N
Pavir.Ga01929
Panicum virgatum
Pavir.Ga01929
N
Pavir.Gb01773
Panicum virgatum
Pavir.Gb01773
N
PGSC0003DMG400001772
Solanum tuberosum
PGSC0003DMG400001772
I
Pm002519
Prunus mume
Pm002519
N
POPTR_0006s13230
Populus trichocarpa
POPTR_0006s13230
I
POPTR_0016s08890
Populus trichocarpa
POPTR_0016s08890
I
PRUPE_ppa014157mg
Prunus persica
PRUPE_ppa014157mg
N
SapurV1A.0112s0080
Salix purpurea
SapurV1A.0112s0080
I
SapurV1A.0209s0130
Salix purpurea
SapurV1A.0209s0130
I
Sb06g015340
Sorghum bicolor
Sb06g015340
N
Si011030m.g
Setaria italica
Si011030m.g
N
Solyc09g007500.2
Solanum lycopersicum
Solyc09g007500.2
I
TCM_022113
Theobroma cacao
TCM_022113
I
Traes_2AL_65586C538
Triticum aestivum
Traes_2AL_65586C538
N
Traes_2BL_26A5F9082
Triticum aestivum
Traes_2BL_26A5F9082
N
Traes_2DL_032C7FC8C
Triticum aestivum
Traes_2DL_032C7FC8C
N
VIT_06s0004g03160
Vitis vinifera
VIT_06s0004g03160
I
VIT_08s0040g02220
Vitis vinifera
VIT_08s0040g02220
I