GE20968 (Drosophila yakuba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 FBgn0238253 T117045_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.827 1.000
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.769 0.850
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.769 0.850
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.769 0.850
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.769 0.850
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.767 0.823
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.767 0.823
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.767 0.823
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.767 0.823
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.767 0.823
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.767 0.823
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.767 0.823
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.767 0.823
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.767 0.823
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.767 0.823
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.767 0.823
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.767 0.823
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.763 0.814
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0265978 C2H2 ZF 306 328
FBpp0265978 C2H2 ZF 341 363
FBpp0265978 C2H2 ZF 367 389
FBpp0265978 C2H2 ZF 395 417
FBpp0265978 C2H2 ZF 423 443

Links

Other C2H2 ZF family TFs
Other Drosophila yakuba TFs

114 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Afo_R005725 Aptenodytes forsteri Afo_R005725 N
Brh_R013360 Buceros rhinoceros Brh_R013360 N
Cmyd_10003651 Chelonia mydas Cmyd_10003651 N
KCMF1 Anolis carolinensis ENSACAG00000005906 N
ENSAMEG00000002032 Ailuropoda melanoleuca ENSAMEG00000002032 N
ENSAMXG00000006684 Astyanax mexicanus ENSAMXG00000006684 N
ENSAPLG00000013426 Anas platyrhynchos ENSAPLG00000013426 N
KCMF1 Bos taurus ENSBTAG00000020630 N
ENSBTAP00000052676-D1 Bos grunniens ENSBTAP00000052676-D1 N
KCMF1 Canis familiaris ENSCAFG00000007871 N
KCMF1 Choloepus hoffmanni ENSCHOG00000005786 N
ENSCJAG00000019735 Callithrix jacchus ENSCJAG00000019735 N
KCMF1 Cavia porcellus ENSCPOG00000023050 N
kcmf1 Danio rerio ENSDARG00000067656 N
KCMF1 Dasypus novemcinctus ENSDNOG00000047192 N
ENSDORG00000002248 Dipodomys ordii ENSDORG00000002248 N
KCMF1 Equus caballus ENSECAG00000024834 N
ENSETEG00000001809 Echinops telfairi ENSETEG00000001809 N
ENSFALG00000005137 Ficedula albicollis ENSFALG00000005137 N
KCMF1 Felis catus ENSFCAG00000026410 N
KCMF1 Homo sapiens ENSG00000176407 N
kcmf1 Gasterosteus aculeatus ENSGACG00000016222 N
ENSGALG00000014441 Gallus gallus ENSGALG00000014441 N
KCMF1 Gorilla gorilla ENSGGOG00000009501 N
ENSGMOG00000014478 Gadus morhua ENSGMOG00000014478 N
KCMF1 Loxodonta africana ENSLAFG00000018643 N
ENSLOCG00000011313 Lepisosteus oculatus ENSLOCG00000011313 N
ENSMEUG00000003898 Macropus eugenii ENSMEUG00000003898 N
KCMF1 Microcebus murinus ENSMICG00000016473 N
KCMF1 Myotis lucifugus ENSMLUG00000000979 N
KCMF1 Macaca mulatta ENSMMUG00000001414 N
KCMF1 Monodelphis domestica ENSMODG00000015567 N
ENSMPUG00000008632 Mustela putorius furo ENSMPUG00000008632 N
Kcmf1 Mus musculus ENSMUSG00000055239 N
ENSNLEG00000001418 Nomascus leucogenys ENSNLEG00000001418 N
KCMF1 Ornithorhynchus anatinus ENSOANG00000007129 N
ENSOARG00000020445 Ovis aries ENSOARG00000020445 N
KCMF1 Oryctolagus cuniculus ENSOCUG00000002533 N
KCMF1 Otolemur garnettii ENSOGAG00000034863 N
KCMF1 Ochotona princeps ENSOPRG00000009018 N
ENSPANG00000007610 Papio anubis ENSPANG00000007610 N
KCMF1 Procavia capensis ENSPCAG00000008538 N
ENSPPYG00000012235 Pongo abelii ENSPPYG00000012235 N
ENSPSIG00000012230 Pelodiscus sinensis ENSPSIG00000012230 N
KCMF1 Pan troglodytes ENSPTRG00000012127 N
KCMF1 Pteropus vampyrus ENSPVAG00000009122 N
Kcmf1 Rattus norvegicus ENSRNOG00000015097 N
ENSSHAG00000009198 Sarcophilus harrisii ENSSHAG00000009198 N
KCMF1 Sus scrofa ENSSSCG00000008242 N
ENSSTOG00000021528 Ictidomys tridecemlineatus ENSSTOG00000021528 N
KCMF1 Tupaia belangeri ENSTBEG00000016438 N
KCMF1 Taeniopygia guttata ENSTGUG00000000265 N
ENSTSYG00000009776 Tarsius syrichta ENSTSYG00000009776 N
KCMF1 Tursiops truncatus ENSTTRG00000001934 N
Gfo_R004112 Geospiza fortis Gfo_R004112 N
Gfo_R013520 Geospiza fortis Gfo_R013520 N
Pvit_16118 Pogona vitticeps Pvit_16118 N
Tal_R012527 Tyto alba Tal_R012527 N
kcmf1 Xenopus tropicalis XB-GENE-1021676 N
kcmf1.L Xenopus laevis XB-GENE-1021681 N