fgenesh_scip_prom.28083.660 (Phytophthora lateralis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 fgenesh_scip_prom.28083.660 T117393_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
fgenesh_scip_prom.28083.660 C2H2 ZF 41 65
fgenesh_scip_prom.28083.660 C2H2 ZF 71 95
fgenesh_scip_prom.28083.660 C2H2 ZF 101 125
fgenesh_scip_prom.28083.660 C2H2 ZF 131 156

Links

Other C2H2 ZF family TFs
Other Phytophthora lateralis TFs

24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
e_gw1.1936.1.1 Phytophthora capsici e_gw1.1936.1.1 N 0.783
e_gw1.2.501.1 Phytophthora capsici e_gw1.2.501.1 N 0.785
e_gw1.34.32.1 Phytophthora capsici e_gw1.34.32.1 N 0.762
e_gw1.34.40.1 Phytophthora capsici e_gw1.34.40.1 N 0.763
F443_10160 Phytophthora parasitica F443_10160 N 0.785
F443_10163 Phytophthora parasitica F443_10163 N 0.759
F443_10168 Phytophthora parasitica F443_10168 N 0.769
F443_10169 Phytophthora parasitica F443_10169 N 0.767
fgenesh_scip_prom.28083.659 Phytophthora lateralis fgenesh_scip_prom.28083.659 N 0.767
fgenesh_scip_prom.28083.9722 Phytophthora lateralis fgenesh_scip_prom.28083.9722 N 0.771
fgenesh_scip_prom.46568.9633 Phytophthora kernoviae fgenesh_scip_prom.46568.9633 N 0.815
fgenesh_scip_prom.46568.9634 Phytophthora kernoviae fgenesh_scip_prom.46568.9634 N 0.767
maker-pir_contig_2201-fgenesh-gene-0.0 Pythium irregulare maker-pir_contig_2201-fgenesh-gene-0.0 N 0.764
maker-pir_contig_723-snap-gene-0.9 Pythium irregulare maker-pir_contig_723-snap-gene-0.9 N 0.762
Phyra76421 Phytophthora ramorum Phyra76421 N 0.771
Phyra76423 Phytophthora ramorum Phyra76423 N 0.812
Phyra76424 Phytophthora ramorum Phyra76424 N 0.767
Physo128916 Phytophthora sojae Physo128916 N 0.776
Physo128919 Phytophthora sojae Physo128919 N 0.773
PYU1_G008748 Pythium ultimum PYU1_G008748 N 0.763
PYU1_G008755 Pythium ultimum PYU1_G008755 N 0.764
PYU1_G008756 Pythium ultimum PYU1_G008756 N 0.760
PYU1_G008757 Pythium ultimum PYU1_G008757 N 0.759
snap_masked-pve_contig_11-abinit-gene-0.108 Pythium vexans snap_masked-pve_contig_11-abinit-gene-0.108 N 0.776