CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GLYMA06G18300
(
Glycine max
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00096 (zf-C2H2)
IPR007087
GLYMA06G18300
T118352_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GLYMA06G18300.1
C2H2 ZF
1449
1472
YQCDIDGCTMSFGSKQELMHHKKN
GLYMA06G18300.1
C2H2 ZF
1473
1496
ICPVKGCGKKFFSHKYLVQHRRVH
GLYMA06G18300.1
C2H2 ZF
1532
1558
YVCAEPDCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Glycine max
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30147.m013814
Ricinus communis
30147.m013814
N
0.757
Aquca_011_00361
Aquilegia coerulea
Aquca_011_00361
N
0.757
Ca_08787
Cicer arietinum
Ca_08787
N
0.803
GLYMA04G36620
Glycine max
GLYMA04G36620
N
0.807
GLYMA04G36630
Glycine max
GLYMA04G36630
N
0.821
GLYMA06G18290
Glycine max
GLYMA06G18290
N
0.811
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.763
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
0.757
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.757
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
0.757
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N
0.757
TCM_014549
Theobroma cacao
TCM_014549
N
0.756