ONIVA01G43630 (Oryza nivara)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 ONIVA01G43630 T124935_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STOP1
M06801_2.00 		Arabidopsis thaliana
CCTBCMCCAGDTRHHMCYY
RRGKDDYAHCTGGKGVAGG		 Dap-seq
OMalley et al.(2016)
STOP1_col_a 		0.803 0.929
STOP1
M06802_2.00 		Arabidopsis thaliana
RCCTNCMCCRGWWRN
NYWWCYGGKGNAGGY		 Dap-seq
OMalley et al.(2016)
STOP1_colamp_a 		0.803 0.929
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ONIVA01G43630.1 C2H2 ZF 483 505
ONIVA01G43630.1 C2H2 ZF 506 531
ONIVA01G43630.2 C2H2 ZF 317 339
ONIVA01G43630.2 C2H2 ZF 340 365
ONIVA01G43630.3 C2H2 ZF 317 339
ONIVA01G43630.3 C2H2 ZF 340 365

Links

Other C2H2 ZF family TFs
Other Oryza nivara TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27524.m000298 Ricinus communis 27524.m000298 I 0.000
ERF118 Arabidopsis thaliana AT1G68550 D 0.000
Bostr.13158s0163 Boechera stricta Bostr.13158s0163 I 0.000
Cagra.0483s0087 Capsella grandiflora Cagra.0483s0087 I 0.000
Carubv10017705m.g Capsella rubella Carubv10017705m.g I 0.000
cassava35757.valid.m1 Manihot esculenta cassava35757.valid.m1 I 0.000
cassava35758.valid.m1 Manihot esculenta cassava35758.valid.m1 I 0.000
cassava43300.valid.m1 Manihot esculenta cassava43300.valid.m1 I 0.000
Ca_05485 Cicer arietinum Ca_05485 I 0.000
Ca_06446 Cicer arietinum Ca_06446 I 0.000
chr2.CM0903.260.nd Lotus japonicus chr2.CM0903.260.nd I 0.000
chr6.LjT13N05.60.nc Lotus japonicus chr6.LjT13N05.60.nc I 0.000
Cla000729 Citrullus lanatus Cla000729 I 0.000
Cla008128 Citrullus lanatus Cla008128 I 0.000
Cla018787 Citrullus lanatus Cla018787 N 0.000
Cla021763 Citrullus lanatus Cla021763 I 0.000
Cucsa.121430 Cucumis sativus Cucsa.121430 N 0.000
Cucsa.256230 Cucumis sativus Cucsa.256230 I 0.000
Cucsa.365320 Cucumis sativus Cucsa.365320 I 0.000
Eucgr.G02326 Eucalyptus grandis Eucgr.G02326 I 0.000
gene03751-v1.0-hybrid Fragaria vesca gene03751-v1.0-hybrid I 0.000
gene25185-v1.0-hybrid Fragaria vesca gene25185-v1.0-hybrid I 0.000
GLYMA01G20383 Glycine max GLYMA01G20383 I 0.000
GLYMA08G15830 Glycine max GLYMA08G15830 I 0.000
GLYMA08G30716 Glycine max GLYMA08G30716 I 0.000
GLYMA10G42130 Glycine max GLYMA10G42130 I 0.000
GLYMA20G24920 Glycine max GLYMA20G24920 I 0.000
Gorai.008G183300 Gossypium raimondii Gorai.008G183300 I 0.000
LjSGA_132504.1 Lotus japonicus LjSGA_132504.1 I 0.000
MDP0000119956 Malus domestica MDP0000119956 I 0.000
MDP0000166779 Malus domestica MDP0000166779 N 0.000
MDP0000743350 Malus domestica MDP0000743350 I 0.000
MDP0000759299 Malus domestica MDP0000759299 I 0.000
mgf006610m Mimulus guttatus mgf006610m I 0.000
PGSC0003DMG400014541 Solanum tuberosum PGSC0003DMG400014541 I 0.000
PGSC0003DMG400015880 Solanum tuberosum PGSC0003DMG400015880 I 0.000
PK24580.1 Cannabis sativa PK24580.1 D 0.000
Pm029052 Prunus mume Pm029052 I 0.000
POPTR_0008s11900 Populus trichocarpa POPTR_0008s11900 I 0.000
PRUPE_ppa008514mg Prunus persica PRUPE_ppa008514mg I 0.000
SapurV1A.0079s0190 Salix purpurea SapurV1A.0079s0190 I 0.000
Solyc04g007180.1 Solanum lycopersicum Solyc04g007180.1 I 0.000
Solyc05g009450.1 Solanum lycopersicum Solyc05g009450.1 I 0.000
TCM_011811 Theobroma cacao TCM_011811 I 0.000
Thhalv10023946m.g Eutrema salsugineum Thhalv10023946m.g I 0.000
VIT_01s0011g03470 Vitis vinifera VIT_01s0011g03470 I 0.000