SMAR001730 (Strigamia maritima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAR001730 T129032_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.779 0.885
wor
M03664_2.00 		Drosophila melanogaster
GYRACAGGTGYAH
DTRCACCTGTYRC		 SELEX
Nitta et al.(2015)
wor_1 		0.759 0.832
wor
M03665_2.00 		Drosophila melanogaster
DTRCACCTGTYGY
RCRACAGGTGYAH		 SELEX
Nitta et al.(2015)
wor_2 		0.759 0.832
wor
M06051_2.00 		Drosophila melanogaster
CACCTGY
RCAGGTG		 B1H
Zhu et al.(2011)
wor_SANGER_2.5_FBgn0001983 		0.759 0.832
wor
M06052_2.00 		Drosophila melanogaster
VCACCTGY
RCAGGTGB		 B1H
Zhu et al.(2011)
wor_SOLEXA_2.5_FBgn0001983 		0.759 0.832
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR001730-PA C2H2 ZF 235 257
SMAR001730-PA C2H2 ZF 266 288
SMAR001730-PA C2H2 ZF 292 314
SMAR001730-PA C2H2 ZF 320 342
SMAR001730-PA C2H2 ZF 348 368

Links

Other C2H2 ZF family TFs
Other Strigamia maritima TFs

48 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP13085 Atta cephalotes ACEP13085 I 0.765
BGIBMGA006230 Bombyx mori BGIBMGA006230 I 0.768
CapteG76255 Capitella teleta CapteG76255 I 0.762
Cflo_07707--XP_393944.1_APIME Camponotus floridanus Cflo_07707--XP_393944.1_APIME I 0.762
CGI_10027813 Crassostrea gigas CGI_10027813 I 0.769
CLEC007039 Cimex lectularius CLEC007039 I 0.777
estExt_fgenesh2_kg.C_190001 Branchiostoma floridae estExt_fgenesh2_kg.C_190001 I 0.777
esg Drosophila melanogaster FBgn0001981 D 0.779
wor Drosophila melanogaster FBgn0001983 D 0.759
GA17666 Drosophila pseudoobscura FBgn0077676 I 0.775
GA17994 Drosophila pseudoobscura FBgn0078003 I 0.759
GF14525 Drosophila ananassae FBgn0091552 I 0.759
GF15382 Drosophila ananassae FBgn0092407 I 0.777
GG24207 Drosophila erecta FBgn0116339 I 0.759
GG25158 Drosophila erecta FBgn0117283 I 0.779
GH13119 Drosophila grimshawi FBgn0120596 I 0.759
GH13754 Drosophila grimshawi FBgn0121230 I 0.777
GI17894 Drosophila mojavensis FBgn0140635 I 0.777
GI22651 Drosophila mojavensis FBgn0145379 I 0.759
GL26425 Drosophila persimilis FBgn0164007 I 0.775
GL26594 Drosophila persimilis FBgn0164176 I 0.759
GM14357 Drosophila sechellia FBgn0169282 I 0.759
GD21956 Drosophila simulans FBgn0193371 I 0.759
GD24004 Drosophila simulans FBgn0195364 I 0.779
GJ17399 Drosophila virilis FBgn0204571 I 0.777
GJ23203 Drosophila virilis FBgn0210305 I 0.759
GK18133 Drosophila willistoni FBgn0220132 I 0.777
GK18253 Drosophila willistoni FBgn0220252 I 0.759
GE19402 Drosophila yakuba FBgn0236745 I 0.759
GE20968 Drosophila yakuba FBgn0238253 I 0.779
HHAL006775-PA Halyomorpha halys HHAL006775-PA I 0.779
HMEL002306 Heliconius melpomene HMEL002306 I 0.772
KGM_17970 Danaus plexippus KGM_17970 I 0.772
L798_10614 Zootermopsis nevadensis L798_10614 I 0.780
LCUP013268 Lucilia cuprina LCUP013268 I 0.779
LDEC001157 Leptinotarsa decemlineata LDEC001157 I 0.773
LotgiG114290 Lottia gigantea LotgiG114290 I 0.768
MCINX001355 Melitaea cinxia MCINX001355 I 0.772
MDOA014024 Musca domestica MDOA014024 I 0.777
NV17743 Nasonia vitripennis NV17743 I 0.765
PHUM091060 Pediculus humanus PHUM091060 I 0.781
PPAI008011 Phlebotomus papatasi PPAI008011 I 0.779
RPRC005707 Rhodnius prolixus RPRC005707 I 0.777
Sakowv30043351m.g Saccoglossus kowalevskii Sakowv30043351m.g I 0.770
SINV14155 Solenopsis invicta SINV14155 I 0.767
SMAR001314 Strigamia maritima SMAR001314 I 0.783
TC014474 Tribolium castaneum TC014474 I 0.770
tetur13g00760 Tetranychus urticae tetur13g00760 I 0.769