SMAR006131 (Strigamia maritima)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00096 (zf-C2H2) IPR007087 SMAR006131 T129084_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
lin-48
M00614_2.00 		Caenorhabditis elegans
HCCGTTAB
VTAACGGD		 PBM
Narasimhan et al.(2015)
pTH9155 		0.786 0.797
ovo
M03669_2.00 		Drosophila melanogaster
DNMCCGTTA
TAACGGKNH		 SELEX
Nitta et al.(2015)
ovo_1 		0.778 0.812
ovo
M06064_2.00 		Drosophila melanogaster
CHGTTAHW
WDTAACDG		 B1H
Zhu et al.(2011)
ovo_FlyReg_FBgn0003028 		0.778 0.812
ovo
M06065_2.00 		Drosophila melanogaster
RGTHCCGTTAT
ATAACGGDACY		 B1H
Zhu et al.(2011)
ovo_SANGER_5_FBgn0003028 		0.778 0.812
ovo
M06066_2.00 		Drosophila melanogaster
DDTMCCGTTABNYN
NRNVTAACGGKAHH		 B1H
Zhu et al.(2011)
ovo_SOLEXA_5_FBgn0003028 		0.778 0.812
ovo
M02671_2.00 		Drosophila melanogaster
DCNGTTWSD
HSWAACNGH		 SELEX
Mathelier et al.(2014)
MA0126.1 		0.778 0.812
ovo
M09662_2.00 		Drosophila melanogaster
DCNGTTAMWNNDV
BHNNWKTAACNGH		 Misc
Kulakovskiy et al.(2009)
ovo 		0.778 0.812
ovo
M10373_2.00 		Drosophila melanogaster
NNNDCNGTTWSDDNN
NNHHSWAACNGHNNN		 Transfac
Matys et al.(2006)
I$OVO_01 		0.778 0.812
ovo
M10374_2.00 		Drosophila melanogaster Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
I$OVO_Q6 		0.778 0.812
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR006131-PA C2H2 ZF 257 279
SMAR006131-PA C2H2 ZF 285 307
SMAR006131-PA C2H2 ZF 313 336

Links

Other C2H2 ZF family TFs
Other Strigamia maritima TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG004454.1 Alligator sinensis Alligator_sinensis_CCG004454.1 I
Cmyd_10017688 Chelonia mydas Cmyd_10017688 I
ENSAMEG00000002010 Ailuropoda melanoleuca ENSAMEG00000002010 I
ENSAMXG00000011871 Astyanax mexicanus ENSAMXG00000011871 I
GLIS2 Bos taurus ENSBTAG00000009199 I
ENSBTAP00000012119-D1 Bos grunniens ENSBTAP00000012119-D1 I
GLIS2 Canis familiaris ENSCAFG00000019227 I
GLIS2 Callithrix jacchus ENSCJAG00000019770 I
ENSCPOG00000004787 Cavia porcellus ENSCPOG00000004787 I
ENSCSAG00000009593 Chlorocebus sabaeus ENSCSAG00000009593 I
GLIS2 Dasypus novemcinctus ENSDNOG00000010899 I
ENSDORG00000014886 Dipodomys ordii ENSDORG00000014886 I
GLIS2 Equus caballus ENSECAG00000020639 I
GLIS2 Erinaceus europaeus ENSEEUG00000007346 I
GLIS2 Echinops telfairi ENSETEG00000006418 I
GLIS2 Felis catus ENSFCAG00000011229 I
GLIS2 Homo sapiens ENSG00000126603 D
GLIS2 Gorilla gorilla ENSGGOG00000004717 I
ENSLACG00000004164 Latimeria chalumnae ENSLACG00000004164 I
GLIS2 Loxodonta africana ENSLAFG00000018480 I
GLIS2 Microcebus murinus ENSMICG00000017817 I
GLIS2 Myotis lucifugus ENSMLUG00000008930 I
GLIS2 Monodelphis domestica ENSMODG00000016375 I
ENSMPUG00000015020 Mustela putorius furo ENSMPUG00000015020 I
Glis2 Mus musculus ENSMUSG00000014303 D
ENSNLEG00000009834 Nomascus leucogenys ENSNLEG00000009834 I
GLIS2 Ornithorhynchus anatinus ENSOANG00000010385 I
ENSOARG00000003260 Ovis aries ENSOARG00000003260 I
GLIS2 Oryctolagus cuniculus ENSOCUG00000012971 I
GLIS2 Otolemur garnettii ENSOGAG00000015200 I
GLIS2 Ochotona princeps ENSOPRG00000000484 I
GLIS2 Procavia capensis ENSPCAG00000011063 I
ENSPPYG00000007055 Pongo abelii ENSPPYG00000007055 I
GLIS2 Pan troglodytes ENSPTRG00000007714 I
GLIS2 Pteropus vampyrus ENSPVAG00000017802 I
Glis2 Rattus norvegicus ENSRNOG00000004766 I
ENSSHAG00000010956 Sarcophilus harrisii ENSSHAG00000010956 I
GLIS2 Sus scrofa ENSSSCG00000023653 I
ENSSTOG00000025049 Ictidomys tridecemlineatus ENSSTOG00000025049 I
glis2b Tetraodon nigroviridis ENSTNIG00000009741 I
GLIS2 Tursiops truncatus ENSTTRG00000002711 I
Myotis_brandtii_GLIS2_10028036 Myotis brandtii Myotis_brandtii_GLIS2_10028036 I
Pvit_18995 Pogona vitticeps Pvit_18995 I
SINV25327 Solenopsis invicta SINV25327 I
SPU_010542 Strongylocentrotus purpuratus SPU_010542 I
glis2.L Xenopus laevis XB-GENE-6252690 I