Aan_R006310 (Calypte anna)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Aan_R006310 T132575_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
OVOL2
M00235_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_REF 		0.812 0.946
OVOL2
M04445_2.00 		Homo sapiens
NNHCCGYTANNHN
NDNNTARCGGDNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_HT-SELEX 		0.812 0.946
OVOL2
M04447_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_HT-SELEX 		0.812 0.946
OVOL2
M10207_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MOVOB_01 		0.812 0.946
OVOL2
M04446_2.00 		Homo sapiens
NNWCCGTTANNHN
NDNNTAACGGWNN		 SELEX
Yin et al.(2017)
OVOL2_eDBD_Methyl-HT-SELEX 		0.812 0.946
OVOL2
M04448_2.00 		Homo sapiens
DDWCCGTTABNHN
NDNVTAACGGWHH		 SELEX
Yin et al.(2017)
OVOL2_FL_Methyl-HT-SELEX 		0.812 0.946
Ovol2
M08993_2.00 		Mus musculus
HCCGTTAN
NTAACGGD		 Misc
Kulakovskiy et al.(2013)
OVOL2_MOUSE.H11MO.0.C 		0.803 0.935
OVOL2
M00234_2.00 		Homo sapiens
NCCGYTANNN
NNNTARCGGN		 PBM
Barrera et al.(2016)
OVOL2_D228E 		0.757 0.935
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aan_R006310 C2H2 ZF 40 62
Aan_R006310 C2H2 ZF 64 90
Aan_R006310 C2H2 ZF 96 119
Aan_R006310 C2H2 ZF 135 158

Links

Other C2H2 ZF family TFs
Other Calypte anna TFs

53 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ocbimv22011482m.g Octopus bimaculoides Ocbimv22011482m.g N
Ocbimv22020991m.g Octopus bimaculoides Ocbimv22020991m.g N
Ocbimv22030456m.g Octopus bimaculoides Ocbimv22030456m.g N