CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Hsal_03140--XP_001121583.1_APIME
(
Harpegnathos saltator
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Hsal_03140--XP_001121583.1_APIME
T135943_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Hsal_03140--XP_001121583.1_APIME
C2H2 ZF
188
212
YPCDYPGCTKAFTQSGQLKTHQRLH
Links
Other
C2H2 ZF
family TFs
Other
Harpegnathos saltator
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006244
Ricinus communis
30169.m006244
N
AC234522.1_FG009
Zea mays
AC234522.1_FG009
N
Aquca_013_00290
Aquilegia coerulea
Aquca_013_00290
N
BGIOSGA031305
Oryza indica
BGIOSGA031305
N
cassava18962.valid.m1
Manihot esculenta
cassava18962.valid.m1
N
evm.TU.supercontig_107.76
Carica papaya
evm.TU.supercontig_107.76
N
gene13234-v1.0-hybrid
Fragaria vesca
gene13234-v1.0-hybrid
N
GLYMA10G37780
Glycine max
GLYMA10G37780
N
Gorai.004G117900
Gossypium raimondii
Gorai.004G117900
N
Gorai.008G275600
Gossypium raimondii
Gorai.008G275600
N
GRMZM2G142502
Zea mays
GRMZM2G142502
N
GSMUA_Achr1G03120_001
Musa acuminata
GSMUA_Achr1G03120_001
N
MDP0000291317
Malus domestica
MDP0000291317
N
mgf002951m
Mimulus guttatus
mgf002951m
N
OBART09G20240
Oryza barthii
OBART09G20240
N
OGLUM09G20980
Oryza glumaepatula
OGLUM09G20980
N
OLONG_005584
Oryza longistaminata
OLONG_005584
N
OMERI01G25790
Oryza meridionalis
OMERI01G25790
N
ONIVA03G00390
Oryza nivara
ONIVA03G00390
N
OPUNC09G18580
Oryza punctata
OPUNC09G18580
N
ORGLA09G0165100
Oryza glaberrima
ORGLA09G0165100
N
ORUFI09G21860
Oryza rufipogon
ORUFI09G21860
N
OS09G0570200
Oryza sativa
OS09G0570200
N
PK09701.1
Cannabis sativa
PK09701.1
N
Pm019310
Prunus mume
Pm019310
N
PRUPE_ppa002336mg
Prunus persica
PRUPE_ppa002336mg
N
TCM_015200
Theobroma cacao
TCM_015200
N
VIT_16s0050g00700
Vitis vinifera
VIT_16s0050g00700
N