CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pvit_03126
(
Pogona vitticeps
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Pvit_03126
T136940_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pvit_03126
C2H2 ZF
491
513
YQCSHCQKTFSSRKNYTKHMFIH
Pvit_03126
C2H2 ZF
519
541
HQCSICWRSFSLRDYLLKHMVTH
Pvit_03126
C2H2 ZF
547
569
FQCSICCKRFTQKSSLNVHMRTH
Pvit_03126
C2H2 ZF
574
596
FQCCICNKYFSHRTLLERHMTTH
Links
Other
C2H2 ZF
family TFs
Other
Pogona vitticeps
TFs
16 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Alligator_sinensis_CCG013964.1
Alligator sinensis
Alligator_sinensis_CCG013964.1
N
0.822
Cmyd_10003616
Chelonia mydas
Cmyd_10003616
N
0.822
ENSACAG00000010650
Anolis carolinensis
ENSACAG00000010650
N
0.827
ENSAMXG00000013012
Astyanax mexicanus
ENSAMXG00000013012
N
0.763
ENSLACG00000008725
Latimeria chalumnae
ENSLACG00000008725
N
0.799
ENSOPRG00000017040
Ochotona princeps
ENSOPRG00000017040
I
0.782
ENSPFOG00000014275
Poecilia formosa
ENSPFOG00000014275
N
0.760
ENSPSIG00000013341
Pelodiscus sinensis
ENSPSIG00000013341
N
0.799
ZBTB45
Sorex araneus
ENSSARG00000001558
I
0.780
ENSSHAG00000004332
Sarcophilus harrisii
ENSSHAG00000004332
N
0.782
ZBTB45
Tetraodon nigroviridis
ENSTNIG00000003273
N
0.756
ENSTRUG00000010240
Takifugu rubripes
ENSTRUG00000010240
N
0.773
ENSXMAG00000014452
Xiphophorus maculatus
ENSXMAG00000014452
N
0.760
Ogr03674
Ophisaurus gracilis
Ogr03674
N
0.827
zbtb45.L
Xenopus laevis
XB-GENE-17330664
N
0.807
zbtb45.S
Xenopus laevis
XB-GENE-5817023
N
0.807