Tal_R003673 (Tyto alba)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Tal_R003673 T137611_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.825 0.991
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.825 0.991
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.825 0.991
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.825 0.991
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.825 0.991
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.825 0.991
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.825 0.991
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.825 0.991
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.825 0.991
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.825 0.991
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.825 0.991
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.825 0.991
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.821 0.982
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.767 0.816
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Tal_R003673 C2H2 ZF 128 150
Tal_R003673 C2H2 ZF 159 181
Tal_R003673 C2H2 ZF 185 207
Tal_R003673 C2H2 ZF 213 235
Tal_R003673 C2H2 ZF 241 262

Links

Other C2H2 ZF family TFs
Other Tyto alba TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Alligator_sinensis_CCG017544.1 Alligator sinensis Alligator_sinensis_CCG017544.1 N
Cmyd_10002293 Chelonia mydas Cmyd_10002293 N
ZHX1 Anolis carolinensis ENSACAG00000009608 N
ENSAMEG00000018759 Ailuropoda melanoleuca ENSAMEG00000018759 N
ENSAMXG00000016320 Astyanax mexicanus ENSAMXG00000016320 N
ENSAPLG00000010954 Anas platyrhynchos ENSAPLG00000010954 N
ZHX1 Bos taurus ENSBTAG00000015334 N
ENSBTAP00000020381-D1 Bos grunniens ENSBTAP00000020381-D1 N
ZHX1 Canis familiaris ENSCAFG00000001001 N
ZHX1 Callithrix jacchus ENSCJAG00000000934 N
ENSCSAG00000010631 Chlorocebus sabaeus ENSCSAG00000010631 N
ZHX1 Dasypus novemcinctus ENSDNOG00000043739 N
ZHX1 Equus caballus ENSECAG00000023451 N
ZHX1 Erinaceus europaeus ENSEEUG00000000664 N
ZHX1 Felis catus ENSFCAG00000013745 N
ZHX1 Homo sapiens ENSG00000165156 D
ZHX1 Gasterosteus aculeatus ENSGACG00000002041 N
ENSGACG00000005679 Gasterosteus aculeatus ENSGACG00000005679 N
ENSGALG00000016378 Gallus gallus ENSGALG00000016378 N
ZHX1 Gorilla gorilla ENSGGOG00000028565 N
ENSLACG00000010412 Latimeria chalumnae ENSLACG00000010412 N
ZHX1 Loxodonta africana ENSLAFG00000005884 N
ENSMEUG00000012682 Macropus eugenii ENSMEUG00000012682 N
ZHX1 Meleagris gallopavo ENSMGAG00000012584 N
ZHX1 Myotis lucifugus ENSMLUG00000013728 N
ZHX1 Macaca mulatta ENSMMUG00000006050 N
ZHX1 Monodelphis domestica ENSMODG00000002035 N
ENSMPUG00000018555 Mustela putorius furo ENSMPUG00000018555 N
Zhx1 Mus musculus ENSMUSG00000022361 N
ENSNLEG00000005308 Nomascus leucogenys ENSNLEG00000005308 N
ENSOARG00000010486 Ovis aries ENSOARG00000010486 N
ZHX1 Oryctolagus cuniculus ENSOCUG00000009776 N
ZHX1 Otolemur garnettii ENSOGAG00000027737 N
ENSONIG00000007283 Oreochromis niloticus ENSONIG00000007283 N
ENSONIG00000014019 Oreochromis niloticus ENSONIG00000014019 N
ENSP00000297857 Macaca fascicularis ENSP00000297857 N
ENSPANG00000017349 Papio anubis ENSPANG00000017349 N
ZHX1 Procavia capensis ENSPCAG00000007447 N
ENSPFOG00000003808 Poecilia formosa ENSPFOG00000003808 N
ENSPPYG00000018856 Pongo abelii ENSPPYG00000018856 N
ENSPSIG00000006703 Pelodiscus sinensis ENSPSIG00000006703 N
ZHX1 Pan troglodytes ENSPTRG00000020550 N
Zhx1 Rattus norvegicus ENSRNOG00000006412 N
ZHX1 Sorex araneus ENSSARG00000008993 N
ENSSHAG00000013245 Sarcophilus harrisii ENSSHAG00000013245 N
ZHX1 Sus scrofa ENSSSCG00000005984 N
ENSSTOG00000016571 Ictidomys tridecemlineatus ENSSTOG00000016571 N
ZHX1 Tupaia belangeri ENSTBEG00000005916 N
ZHX1 Tetraodon nigroviridis ENSTNIG00000019079 N
ZHX1 Takifugu rubripes ENSTRUG00000017544 N
ZHX1 Tursiops truncatus ENSTTRG00000005426 N
ENSXMAG00000001501 Xiphophorus maculatus ENSXMAG00000001501 N
Myotis_brandtii_ZHX1_10012476 Myotis brandtii Myotis_brandtii_ZHX1_10012476 N
Pvit_18219 Pogona vitticeps Pvit_18219 N