CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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30147.m013814
(
Ricinus communis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
30147.m013814
T137799_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
30147.m013814
C2H2 ZF
1620
1643
YQCDIEGCTMSFGSKQELAVHKRN
30147.m013814
C2H2 ZF
1644
1667
ICPVKGCGKTFLSHKYLVQHRRVH
30147.m013814
C2H2 ZF
1703
1729
YVCAEEGCGQTFRFVSDFSRHKRKTGH
Links
Other
C2H2 ZF
family TFs
Other
Ricinus communis
TFs
12 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava30243.valid.m1
Manihot esculenta
cassava30243.valid.m1
N
0.797
cassava3225.m1
Manihot esculenta
cassava3225.m1
N
0.824
Ca_08787
Cicer arietinum
Ca_08787
N
0.768
Cucsa.391680
Cucumis sativus
Cucsa.391680
N
0.764
GLYMA04G36630
Glycine max
GLYMA04G36630
N
0.764
GLYMA06G18300
Glycine max
GLYMA06G18300
N
0.757
Gorai.006G270100
Gossypium raimondii
Gorai.006G270100
N
0.760
Lus10043332.g
Linum usitatissimum
Lus10043332.g
N
0.814
POPTR_0012s09390
Populus trichocarpa
POPTR_0012s09390
N
0.781
POPTR_0015s10040
Populus trichocarpa
POPTR_0015s10040
N
0.781
SapurV1A.0486s0080
Salix purpurea
SapurV1A.0486s0080
N
0.781
TCM_014549
Theobroma cacao
TCM_014549
N
0.767