CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_chr_4.10468
(
Pichia stipitis
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh1_pg.C_chr_4.10468
T138540_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_chr_4.10468
C2H2 ZF
429
450
RCRICNKQFKRPSSLQTHYYSH
estExt_fgenesh1_pg.C_chr_4.10468
C2H2 ZF
456
480
FKCPWPGCGRLFSVKSNMTRHYRLH
Links
Other
C2H2 ZF
family TFs
Other
Pichia stipitis
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CANTEDRAFT_113303
Candida tenuis
CANTEDRAFT_113303
N
0.785
CaO19.217
Candida albicans
CaO19.217
N
0.827
CaO19.7849
Candida albicans
CaO19.7849
N
0.827
CD36_23070
Candida dubliniensis
CD36_23070
N
0.827
CORT_0C02650
Candida orthopsilosis
CORT_0C02650
N
0.802
CPAG_02311
Candida parapsilosis
CPAG_02311
N
0.826
CTRG_01953
Candida tropicalis
CTRG_01953
N
0.826
G210_5934
Candida maltosa
G210_5934
N
0.783
KUCA_T00003370001
Kuraishia capsulata
KUCA_T00003370001
N
0.761
LELG_02546
Lodderomyces elongisporus
LELG_02546
N
0.804
PGUG_01805
Candida guilliermondii
PGUG_01805
N
0.812
PGUG_01805
Meyerozyma guilliermondii
PGUG_01805
N
0.812
PICST_67626
Scheffersomyces stipitis
PICST_67626
N
0.827