estExt_fgenesh2_pg.C_10050003 (Branchiostoma floridae)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 estExt_fgenesh2_pg.C_10050003 T138572_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_10050003 C2H2 ZF 3 26

Links

Other C2H2 ZF family TFs
Other Branchiostoma floridae TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27613.m000644 Ricinus communis 27613.m000644 N
MTERF9 Arabidopsis thaliana AT5G55580 N
Bo3g021450 Brassica oleracea Bo3g021450 N
Bostr.26833s0699 Boechera stricta Bostr.26833s0699 N
Bra028970 Brassica rapa Bra028970 N
Cagra.6942s0013 Capsella grandiflora Cagra.6942s0013 N
Carubv10026264m.g Capsella rubella Carubv10026264m.g N
cassava31397.valid.m1 Manihot esculenta cassava31397.valid.m1 N
Ca_09700 Cicer arietinum Ca_09700 N
Eucgr.F03524 Eucalyptus grandis Eucgr.F03524 N
GLYMA02G46750 Glycine max GLYMA02G46750 N
GLYMA14G01940 Glycine max GLYMA14G01940 N
Gorai.013G155100 Gossypium raimondii Gorai.013G155100 N
mgf013248m Mimulus guttatus mgf013248m N
MTR_5g094610 Medicago truncatula MTR_5g094610 N
PGSC0003DMG401029813 Solanum tuberosum PGSC0003DMG401029813 N
PK04020.1 Cannabis sativa PK04020.1 N
POPTR_0001s37280 Populus trichocarpa POPTR_0001s37280 N
SapurV1A.0031s0210 Salix purpurea SapurV1A.0031s0210 N
TCM_030731 Theobroma cacao TCM_030731 N
Thhalv10013311m.g Eutrema salsugineum Thhalv10013311m.g N