CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh3_kg.C_70245
(
Neurospora discreta
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
estExt_fgenesh3_kg.C_70245
T138797_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU03184
M01474_2.00
Neurospora crassa
NDNNVATCNN
NNGATBNNHN
PBM
Najafabadi et al.(2015a)
pTH10252
0.827
1.000
For this family, TFs with SR scores >
0.755
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh3_kg.C_70245
C2H2 ZF
234
256
YICQTCNKAFSRPSSLRIHSHSH
estExt_fgenesh3_kg.C_70245
C2H2 ZF
262
287
FKCPHAGCGKAFSVRSNMKRHERGCH
Links
Other
C2H2 ZF
family TFs
Other
Neurospora discreta
TFs
128 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Pavir.Ga01785
Panicum virgatum
Pavir.Ga01785
N
Pavir.J14631
Panicum virgatum
Pavir.J14631
N
Sb06g017190
Sorghum bicolor
Sb06g017190
N