CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22023510m.g
(
Octopus bimaculoides
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
Ocbimv22023510m.g
T141485_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22023510m.p
C2H2 ZF
12
34
YSCKYCGKIFPRSANLTRHLRTH
Ocbimv22023510m.p
C2H2 ZF
40
63
YKCKFCERSFSISSNLQRHVRNIH
Ocbimv22023510m.p
C2H2 ZF
69
91
FRCTLCGKSFGQQTNLDRHVKKH
Links
Other
C2H2 ZF
family TFs
Other
Octopus bimaculoides
TFs
74 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
MDP0000185853
Malus domestica
MDP0000185853
N
MDP0000303501
Malus domestica
MDP0000303501
N
Pm025575
Prunus mume
Pm025575
N
Pm025576
Prunus mume
Pm025576
N
Pm025614
Prunus mume
Pm025614
N
Pm025630
Prunus mume
Pm025630
N
PRUPE_ppa013383mg
Prunus persica
PRUPE_ppa013383mg
N
PRUPE_ppa018410mg
Prunus persica
PRUPE_ppa018410mg
N
PRUPE_ppa023499mg
Prunus persica
PRUPE_ppa023499mg
N
PRUPE_ppa026256mg
Prunus persica
PRUPE_ppa026256mg
N