Ocbimv22037779m.g (Octopus bimaculoides)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Ocbimv22037779m.g T142072_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Ocbimv22037779m.p C2H2 ZF 34 56

Links

Other C2H2 ZF family TFs
Other Octopus bimaculoides TFs

14 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29596.m000720 Ricinus communis 29596.m000720 N
AMTR_s00019p00253580 Amborella trichopoda AMTR_s00019p00253580 N
cassava1724.valid.m1 Manihot esculenta cassava1724.valid.m1 N
cassava249.valid.m1 Manihot esculenta cassava249.valid.m1 N
Ca_14968 Cicer arietinum Ca_14968 N
chr1.CM0289.360.nc Lotus japonicus chr1.CM0289.360.nc N
Ciclev10002056m.g Citrus clementina Ciclev10002056m.g N
Cla022486 Citrullus lanatus Cla022486 N
Cucsa.160530 Cucumis sativus Cucsa.160530 N
Eucgr.F02157 Eucalyptus grandis Eucgr.F02157 N
evm.TU.supercontig_3189.1 Carica papaya evm.TU.supercontig_3189.1 N
gene26537-v1.0-hybrid Fragaria vesca gene26537-v1.0-hybrid N
GLYMA02G37980 Glycine max GLYMA02G37980 N
GLYMA04G10330 Glycine max GLYMA04G10330 N
GLYMA14G36150 Glycine max GLYMA14G36150 N
Gorai.005G097100 Gossypium raimondii Gorai.005G097100 N
Gorai.009G279200 Gossypium raimondii Gorai.009G279200 N
Gorai.010G033500 Gossypium raimondii Gorai.010G033500 N
LjT45A20.70.nd Lotus japonicus LjT45A20.70.nd N
MDP0000303048 Malus domestica MDP0000303048 N
MTR_5g066510 Medicago truncatula MTR_5g066510 N
orange1.1g022924m.g Citrus sinensis orange1.1g022924m.g N
PGSC0003DMG400033576 Solanum tuberosum PGSC0003DMG400033576 N
PK04210.1 Cannabis sativa PK04210.1 N
Pm004390 Prunus mume Pm004390 N
POPTR_0002s11150 Populus trichocarpa POPTR_0002s11150 N
POPTR_0005s19580 Populus trichocarpa POPTR_0005s19580 N
PRUPE_ppa009340mg Prunus persica PRUPE_ppa009340mg N
SapurV1A.0004s0630 Salix purpurea SapurV1A.0004s0630 N
SapurV1A.0320s0100 Salix purpurea SapurV1A.0320s0100 N
Solyc01g106030.2 Solanum lycopersicum Solyc01g106030.2 N
Solyc10g047640.1 Solanum lycopersicum Solyc10g047640.1 N
TCM_034530 Theobroma cacao TCM_034530 N
VIT_03s0038g00480 Vitis vinifera VIT_03s0038g00480 N
TIFY1 Vitis vinifera VIT_18s0001g07720 N