Sakowv30043351m.g (Saccoglossus kowalevskii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Sakowv30043351m.g T142488_2.00 JGI:Metazome (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
esg
M06050_2.00 		Drosophila melanogaster
CACCTGH
DCAGGTG		 B1H
Zhu et al.(2011)
esg_SANGER_2.5_FBgn0001981 		0.790 0.850
SNAI2
M00221_2.00 		Homo sapiens
HACYTGH
DCARGTD		 PBM
Barrera et al.(2016)
SNAI2_REF 		0.764 0.858
SNAI2
M02873_2.00 		Homo sapiens
VCACCTGYN
NRCAGGTGB		 SELEX
Jolma et al.(2013)
SNAI2_1 		0.764 0.858
SNAI2
M04392_2.00 		Homo sapiens
YGCACCTGYY
RRCAGGTGCR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_HT-SELEX 		0.764 0.858
SNAI2
M04394_2.00 		Homo sapiens
YRCACCTGYY
RRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_HT-SELEX 		0.764 0.858
SNAI2
M08853_2.00 		Homo sapiens
NVCACCTGYY
RRCAGGTGBN		 Misc
Kulakovskiy et al.(2013)
SNAI2_HUMAN.H11MO.0.A 		0.764 0.858
Snai2
M08973_2.00 		Mus musculus
VNRCACCTGYY
RRCAGGTGYNB		 Misc
Kulakovskiy et al.(2013)
SNAI2_MOUSE.H11MO.0.A 		0.764 0.858
SNAI2
M10102_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_01 		0.764 0.858
SNAI2
M10103_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6_02 		0.764 0.858
SNAI2
M10104_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SLUG_Q6 		0.764 0.858
SNAI2
M00220_2.00 		Homo sapiens
NHACCTGY
RCAGGTDN		 PBM
Barrera et al.(2016)
SNAI2_D119E 		0.764 0.858
SNAI2
M04393_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_eDBD_Methyl-HT-SELEX 		0.764 0.858
SNAI2
M04395_2.00 		Homo sapiens
YRCACCTGYN
NRCAGGTGYR		 SELEX
Yin et al.(2017)
SNAI2_FL_Methyl-HT-SELEX 		0.764 0.858
SNAI2
M00222_2.00 		Homo sapiens
HACYTGHNNN
NNNDCARGTD		 PBM
Barrera et al.(2016)
SNAI2_T234I 		0.760 0.850
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
23954104_peptide C2H2 ZF 145 167
23954104_peptide C2H2 ZF 176 198
23954104_peptide C2H2 ZF 202 224
23954104_peptide C2H2 ZF 230 252
23954104_peptide C2H2 ZF 258 278

Links

Other C2H2 ZF family TFs
Other Saccoglossus kowalevskii TFs

96 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSAMEG00000010404 Ailuropoda melanoleuca ENSAMEG00000010404 N
ADNP2 Bos taurus ENSBTAG00000005916 N
ENSBTAP00000007769-D1 Bos grunniens ENSBTAP00000007769-D1 N
ADNP2 Canis familiaris ENSCAFG00000000007 N
ADNP2 Choloepus hoffmanni ENSCHOG00000012944 N
ADNP2 Callithrix jacchus ENSCJAG00000010119 N
ENSCSAG00000018257 Chlorocebus sabaeus ENSCSAG00000018257 N
ADNP2 Dasypus novemcinctus ENSDNOG00000003747 N
ADNP2 Equus caballus ENSECAG00000008310 N
ADNP2 Felis catus ENSFCAG00000022677 N
ADNP2 Homo sapiens ENSG00000101544 N
ADNP2 Gorilla gorilla ENSGGOG00000003551 N
ADNP2 Loxodonta africana ENSLAFG00000001597 N
ENSMEUG00000007373 Macropus eugenii ENSMEUG00000007373 N
ADNP2 Myotis lucifugus ENSMLUG00000006751 N
ADNP2 Macaca mulatta ENSMMUG00000013710 N
ENSMMUP00000018027 Macaca fascicularis ENSMMUP00000018027 N
ADNP2 Monodelphis domestica ENSMODG00000011929 N
ENSMPUG00000016665 Mustela putorius furo ENSMPUG00000016665 N
ENSNLEG00000008406 Nomascus leucogenys ENSNLEG00000008406 N
ENSOARG00000004037 Ovis aries ENSOARG00000004037 N
ADNP2 Oryctolagus cuniculus ENSOCUG00000009233 N
ADNP2 Otolemur garnettii ENSOGAG00000032513 N
ADNP2 Ochotona princeps ENSOPRG00000000455 N
ENSPANG00000011713 Papio anubis ENSPANG00000011713 N
ENSPPYG00000009265 Pongo abelii ENSPPYG00000009265 N
ADNP2 Pan troglodytes ENSPTRG00000010138 N
ADNP2 Pteropus vampyrus ENSPVAG00000009159 N
ENSSHAG00000005235 Sarcophilus harrisii ENSSHAG00000005235 N
ENSSSCG00000005774 Sus scrofa ENSSSCG00000005774 N
ADNP2 Tupaia belangeri ENSTBEG00000001298 N
ADNP2 Vicugna pacos ENSVPAG00000001203 N
Myotis_brandtii_ADNP2_10034220 Myotis brandtii Myotis_brandtii_ADNP2_10034220 N