CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene25213-v1.0-hybrid
(
Fragaria vesca
)
C2H2 ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00096 (zf-C2H2)
IPR007087
gene25213-v1.0-hybrid
T142976_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna25213.1-v1.0-hybrid
C2H2 ZF
226
248
ECPQCGAKFSSVTTLIDHVQKVH
mrna25213.1-v1.0-hybrid
C2H2 ZF
264
286
ACPKCSKGFRDPVALVEHVEKEH
Links
Other
C2H2 ZF
family TFs
Other
Fragaria vesca
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
GLYMA02G31550
Glycine max
GLYMA02G31550
N
0.759
Gorai.006G137400
Gossypium raimondii
Gorai.006G137400
N
0.764
MDP0000305771
Malus domestica
MDP0000305771
N
0.764
MDP0000652898
Malus domestica
MDP0000652898
N
0.764
PK23633.1
Cannabis sativa
PK23633.1
N
0.764