Pavir.J33131 (Panicum virgatum)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Pavir.J33131 T143429_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Pavir.J33131.1.p C2H2 ZF 155 178
Pavir.J33131.2.p C2H2 ZF 155 178

Links

Other C2H2 ZF family TFs
Other Panicum virgatum TFs

17 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
30170.m014243 Ricinus communis 30170.m014243 N
Aquca_095_00028 Aquilegia coerulea Aquca_095_00028 N
BGIOSGA023284 Oryza indica BGIOSGA023284 N
Ca_20172 Cicer arietinum Ca_20172 N
Ciclev10002005m.g Citrus clementina Ciclev10002005m.g N
Cla023847 Citrullus lanatus Cla023847 N
Cucsa.272470 Cucumis sativus Cucsa.272470 N
Eucgr.F01824 Eucalyptus grandis Eucgr.F01824 N
Eucgr.L02193 Eucalyptus grandis Eucgr.L02193 N
evm.TU.contig_24967.6 Carica papaya evm.TU.contig_24967.6 N
evm.TU.supercontig_438.4 Carica papaya evm.TU.supercontig_438.4 N
Gorai.009G309200 Gossypium raimondii Gorai.009G309200 N
LjSGA_008446.2 Lotus japonicus LjSGA_008446.2 N
LPERR06G17810 Leersia perrieri LPERR06G17810 N
Lus10040069.g Linum usitatissimum Lus10040069.g N
mgf016987m Mimulus guttatus mgf016987m N
mgf025972m Mimulus guttatus mgf025972m N
MTR_1g050502 Medicago truncatula MTR_1g050502 N
OBART06G21250 Oryza barthii OBART06G21250 N
OGLUM06G22450 Oryza glumaepatula OGLUM06G22450 N
OMERI01G31300 Oryza meridionalis OMERI01G31300 N
ONIVA06G25200 Oryza nivara ONIVA06G25200 N
OPUNC06G19380 Oryza punctata OPUNC06G19380 N
orange1.1g022379m.g Citrus sinensis orange1.1g022379m.g N
ORUFI06G22890 Oryza rufipogon ORUFI06G22890 N
BZIP50 Oryza sativa OS06G0622700 N
PGSC0003DMG400010008 Solanum tuberosum PGSC0003DMG400010008 N
PK05989.1 Cannabis sativa PK05989.1 N
Pm022886 Prunus mume Pm022886 N
POPTR_0005s27930 Populus trichocarpa POPTR_0005s27930 N
PRUPE_ppa008311mg Prunus persica PRUPE_ppa008311mg N
SapurV1A.0554s0190 Salix purpurea SapurV1A.0554s0190 N
Solyc04g082890.2 Solanum lycopersicum Solyc04g082890.2 N
TCM_034804 Theobroma cacao TCM_034804 N
ATBZIP60 Vitis vinifera VIT_18s0122g00500 N