Scas_Contig670.2 (Saccharomyces castellii)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 Scas_Contig670.2 T144959_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
STP4
M00018_2.00 		Saccharomyces cerevisiae
NNNKSTRDN
NHYASMNNN		 PBM
Badis et al.(2008)
STP4_2135 		0.827 0.913
STP4
M01526_2.00 		Saccharomyces cerevisiae
TRCGGCKB
VMGCCGYA		 PBM
Zhu et al.(2009)
Stp4 		0.827 0.913
STP4
M07448_2.00 		Saccharomyces cerevisiae
NGCGCTABH
DVTAGCGCN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0397.1 		0.827 0.913
STP3
M00034_2.00 		Saccharomyces cerevisiae
NTAGCGBD
HVCGCTAN		 PBM
Badis et al.(2008)
STP3_4483 		0.788 0.826
STP3
M07464_2.00 		Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0396.1 		0.788 0.826
STP3
M08535_2.00 		Saccharomyces cerevisiae
DNTAGCGBN
NVCGCTANH		 Misc
DeBoer et al.(2011)
YLR375W_568 		0.788 0.826
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Scas_Contig670.2 C2H2 ZF 279 301

Links

Other C2H2 ZF family TFs
Other Saccharomyces castellii TFs

23 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
15460_YLR375W Saccharomyces paradoxus 15460_YLR375W I 0.788
15823_YLR375W Saccharomyces mikatae 15823_YLR375W I 0.788
16393_YLR375W Saccharomyces bayanus 16393_YLR375W I 0.788
3056_YDL048C Saccharomyces mikatae 3056_YDL048C I 0.827
3579_YDL048C Saccharomyces paradoxus 3579_YDL048C I 0.827
3742_YDL048C Saccharomyces bayanus 3742_YDL048C I 0.815
KAFR_0A06120 Kazachstania africana KAFR_0A06120 I 0.767
KLTH0D13618g Lachancea thermotolerans KLTH0D13618g I 0.776
KLTH0D13618g Kluyveromyces thermotolerans KLTH0D13618g I 0.776
NCAS_0A02360 Naumovozyma castellii NCAS_0A02360 I 0.827
NCAS_0J01300 Naumovozyma castellii NCAS_0J01300 I 0.827
NDAI_0D04510 Naumovozyma dairenensis NDAI_0D04510 I 0.827
Scas_Contig683.30 Saccharomyces castellii Scas_Contig683.30 I 0.827
SKUD_202710 Saccharomyces kudriavzevii SKUD_202710 I 0.788
SU7_0544 Saccharomyces arboricola SU7_0544 I 0.815
SU7_2363 Saccharomyces arboricola SU7_2363 I 0.788
TBLA_0I02770 Tetrapisispora blattae TBLA_0I02770 I 0.769
TDEL_0E01520 Torulaspora delbrueckii TDEL_0E01520 I 0.827
STP4 Saccharomyces cerevisiae YDL048C D 0.827
STP3 Saccharomyces cerevisiae YLR375W D 0.788
ZBAI_02561 Zygosaccharomyces bailii ZBAI_02561 I 0.776
ZBAI_06958 Zygosaccharomyces bailii ZBAI_06958 I 0.776
ZYRO0B07436g Zygosaccharomyces rouxii ZYRO0B07436g I 0.827