sp2 (Xenopus tropicalis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-968274 T145670_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP2
M04525_2.00 		Homo sapiens
NYWAGYCCCGCCCMCYH
DRGKGGGCGGGRCTWRN		 SELEX
Yin et al.(2017)
SP2_eDBD_HT-SELEX 		0.806 0.884
SP2
M08326_2.00 		Homo sapiens
YCCCGCCCM
KGGGCGGGR		 ChIP-seq
Schmitges et al.(2016)
Q02086_1-3.RCADE 		0.806 0.884
SP2
M08092_2.00 		Homo sapiens
BYCCCGCCYCYBNNB
VNNVRGRGGCGGGRV		 ChIP-seq
Mathelier et al.(2014)
MA0516.1 		0.806 0.884
SP2
M07932_2.00 		Homo sapiens
KSCTAGAGMGGCBVB
VBVGCCKCTCTAGSM		 ChIP-seq
Gerstein et al.(2012)
K562_SP2_HudsonAlpha 		0.806 0.884
SP2
M08911_2.00 		Homo sapiens
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_HUMAN.H11MO.0.A 		0.806 0.884
Sp2
M08970_2.00 		Mus musculus
SBBSNVSBCCCGCCYCYBBBBS
SVVVVRGRGGCGGGVSBNSVVS		 Misc
Kulakovskiy et al.(2013)
SP2_MOUSE.H11MO.0.B 		0.806 0.884
SP2
M10250_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_01 		0.806 0.884
SP2
M10251_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_04 		0.806 0.884
SP2
M10252_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_06 		0.806 0.884
SP2
M10253_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3_01 		0.806 0.884
SP2
M10254_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$SP2_Q3 		0.806 0.884
SP2
M04526_2.00 		Homo sapiens
NTWAGYCCCGCCCMCTT
AAGKGGGCGGGRCTWAN		 SELEX
Yin et al.(2017)
SP2_eDBD_Methyl-HT-SELEX 		0.806 0.884
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAI54679 C2H2 ZF 471 495
AAI54679 C2H2 ZF 501 525
AAI54679 C2H2 ZF 534 556
CAJ82297 C2H2 ZF 471 495
CAJ82297 C2H2 ZF 501 525
CAJ82297 C2H2 ZF 534 556

Links

Other C2H2 ZF family TFs
Other Xenopus tropicalis TFs

56 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL004033 Aedes aegypti AAEL004033 N
AALB008452 Anopheles albimanus AALB008452 N
AARA011457 Anopheles arabiensis AARA011457 I
AATE008437 Anopheles atroparvus AATE008437 N
ACEP17328 Atta cephalotes ACEP17328 N
ACUA026159 Anopheles culicifacies ACUA026159 N
ADIR006386 Anopheles dirus ADIR006386 N
AEPI002734 Anopheles epiroticus AEPI002734 N
AFAF005788 Anopheles farauti AFAF005788 N
Afo_R002915 Aptenodytes forsteri Afo_R002915 N
AMAM003654 Anopheles maculatus AMAM003654 I
AMAM013696 Anopheles maculatus AMAM013696 N
AMEC008489 Anopheles melas AMEC008489 I
AMEC022035 Anopheles melas AMEC022035 N
AMEM013182 Anopheles merus AMEM013182 N
AMIN002697 Anopheles minimus AMIN002697 N
AMIN005749 Anopheles minimus AMIN005749 I
ANCDUO_24100 Ancylostoma duodenale ANCDUO_24100 N
AQUA009532 Anopheles quadriannulatus AQUA009532 N
ASIM_0001695301 Anisakis simplex ASIM_0001695301 N
ASIS022603 Anopheles sinensis ASIS022603 N
augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf02139-processed-gene-0.0 N
A_02867 Schistosoma haematobium A_02867 N
BGIBMGA010051 Bombyx mori BGIBMGA010051 N
Bm5188 Brugia malayi Bm5188 N
CapteG6193 Capitella teleta CapteG6193 N
CLEC002616 Cimex lectularius CLEC002616 N
CLEC013163 Cimex lectularius CLEC013163 I
CPIJ001077 Culex quinquefasciatus CPIJ001077 I
CPIJ001377 Culex quinquefasciatus CPIJ001377 N
CpipJ_CPIJ001077 Culex pipiens CpipJ_CPIJ001077 I
CpipJ_CPIJ001377 Culex pipiens CpipJ_CPIJ001377 N
D917_05078 Trichinella nativa D917_05078 N
D917_08408 Trichinella nativa D917_08408 N
DICVIV_02945 Dictyocaulus viviparus DICVIV_02945 N
ECPE_0000358001 Echinostoma caproni ECPE_0000358001 N
ENSAPLG00000005538 Anas platyrhynchos ENSAPLG00000005538 I
NKX6-1 Choloepus hoffmanni ENSCHOG00000005454 I
ENSECAG00000018325 Equus caballus ENSECAG00000018325 I
ENSMEUG00000003167 Macropus eugenii ENSMEUG00000003167 I
ENSMEUG00000009353 Macropus eugenii ENSMEUG00000009353 I
ENSMICG00000002512 Microcebus murinus ENSMICG00000002512 I
ENSMICG00000006922 Microcebus murinus ENSMICG00000006922 I
ENSOANG00000006212 Ornithorhynchus anatinus ENSOANG00000006212 I
ENSOARG00000007317 Ovis aries ENSOARG00000007317 N
NKX6-2 Procavia capensis ENSPCAG00000000708 N
ENSPFOG00000002761 Poecilia formosa ENSPFOG00000002761 I
ENSPMAG00000010239 Petromyzon marinus ENSPMAG00000010239 I
ENSPSIG00000008536 Pelodiscus sinensis ENSPSIG00000008536 I
ENSSHAG00000002937 Sarcophilus harrisii ENSSHAG00000002937 I
NKX6-1 Sus scrofa ENSSSCG00000009232 I
nkx3.2 Takifugu rubripes ENSTRUG00000014438 I
EVEC_0000660801 Enterobius vermicularis EVEC_0000660801 N
fgenesh2_pg.scaffold_205000001 Branchiostoma floridae fgenesh2_pg.scaffold_205000001 I
Gfo_R008628 Geospiza fortis Gfo_R008628 I
HHAL007703-PA Halyomorpha halys HHAL007703-PA N
HPLM_0001802901 Haemonchus placei HPLM_0001802901 I
Hsal_06171--XP_001121097.1_APIME Harpegnathos saltator Hsal_06171--XP_001121097.1_APIME N
ISCW002094 Ixodes scapularis ISCW002094 I
ISCW014430 Ixodes scapularis ISCW014430 N
KGM_13904 Danaus plexippus KGM_13904 N
L596_g27058 Steinernema carpocapsae L596_g27058 N
LCUP008694 Lucilia cuprina LCUP008694 N
LCUP012257 Lucilia cuprina LCUP012257 I
LDEC001243 Leptinotarsa decemlineata LDEC001243 I
LDEC017209 Leptinotarsa decemlineata LDEC017209 N
MCINX001506 Melitaea cinxia MCINX001506 I
MCINX004710 Melitaea cinxia MCINX004710 N
MESCA002384 Megaselia scalaris MESCA002384 I
Myotis_brandtii_NKX6_10030510 Myotis brandtii Myotis_brandtii_NKX6_10030510 N
nLs.2.1.2.g06018 Litomosoides sigmodontis nLs.2.1.2.g06018 N
nOo.2.0.1.g02038 Onchocerca ochengi nOo.2.0.1.g02038 I
nRc.2.0.1.g06912 Romanomermis culicivorax nRc.2.0.1.g06912 N
Ocbimv22025901m.g Octopus bimaculoides Ocbimv22025901m.g N
OFLC_0001516501 Onchocerca flexuosa OFLC_0001516501 N
PEQ_0000511901 Parascaris equorum PEQ_0000511901 I
PHUM359870 Pediculus humanus PHUM359870 N
Ppa-cog-1 Pristionchus pacificus PPA04716 N
PPAI007703 Phlebotomus papatasi PPAI007703 N
PXEA_0000446101 Protopolystoma xenopodis PXEA_0000446101 N
SCUD_0002097601 Schistosoma curassoni SCUD_0002097601 N
SINV25324 Solenopsis invicta SINV25324 I
Sjc_0111830 Schistosoma japonicum Sjc_0111830 N
SPER_0003668801 Spirometra erinaceieuropaei SPER_0003668801 I
SROB_0001175701 Schistosoma rodhaini SROB_0001175701 N
SROB_0001257001 Schistosoma rodhaini SROB_0001257001 N
TCNE_0001839401 Toxocara canis TCNE_0001839401 N
TRE_0000644601 Trichobilharzia regenti TRE_0000644601 N
WUBG_08661 Wuchereria bancrofti WUBG_08661 N
YQE_09155 Dendroctonus ponderosae YQE_09155 N