fezf1.S (Xenopus laevis)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 XB-GENE-985994 T145716_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FEZF1
M08307_2.00 		Homo sapiens
NNBTGYYYTTTTNNN
NNNAAAARRRCAVNN		 ChIP-seq
Schmitges et al.(2016)
A0PJY2_1-5.RCADE 		0.815 0.986
FEZF1
M08889_2.00 		Homo sapiens
DYTGYYCWTTTN
NAAAWGRRCARH		 Misc
Kulakovskiy et al.(2013)
FEZF1_HUMAN.H11MO.0.C 		0.815 0.986
erm
M03686_2.00 		Drosophila melanogaster
TGATTGCTCWTTT
AAAWGAGCAATCA		 SELEX
Nitta et al.(2015)
CG31670_1 		0.794 0.891
erm
M06128_2.00 		Drosophila melanogaster
KWTGYKCWTTT
AAAWGMRCAWM		 B1H
Zhu et al.(2011)
CG31670_SANGER_5_FBgn0031375 		0.794 0.891
erm
M06129_2.00 		Drosophila melanogaster
BBRTTGCTCWTTTBN
NVAAAWGAGCAAYVV		 B1H
Zhu et al.(2011)
CG31670_SOLEXA_5_FBgn0031375 		0.794 0.891
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
AAF26844 C2H2 ZF 261 283
AAF26844 C2H2 ZF 289 311
AAF26844 C2H2 ZF 317 339
AAF26844 C2H2 ZF 345 367
AAF26844 C2H2 ZF 373 395
AAF26844 C2H2 ZF 401 424

Links

Other C2H2 ZF family TFs
Other Xenopus laevis TFs

168 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AC212859.3_FG008 Zea mays AC212859.3_FG008 N
BGIOSGA027807 Oryza indica BGIOSGA027807 N
BRADI1G52187 Brachypodium distachyon BRADI1G52187 I
BRADI3G13117 Brachypodium distachyon BRADI3G13117 N
BRADI5G27467 Brachypodium distachyon BRADI5G27467 N
e_gw1.70.85.1 Physcomitrella patens e_gw1.70.85.1 N
F775_00942 Aegilops tauschii F775_00942 N
F775_07224 Aegilops tauschii F775_07224 I
F775_12735 Aegilops tauschii F775_12735 N
F775_16517 Aegilops tauschii F775_16517 N
F775_52611 Aegilops tauschii F775_52611 N
GRMZM2G041668 Zea mays GRMZM2G041668 I
GRMZM2G048826 Zea mays GRMZM2G048826 N
GRMZM2G052239 Zea mays GRMZM2G052239 I
GRMZM2G440219 Zea mays GRMZM2G440219 I
GSMUA_Achr3G22360_001 Musa acuminata GSMUA_Achr3G22360_001 N
LPERR06G00240 Leersia perrieri LPERR06G00240 I
LPERR08G00380 Leersia perrieri LPERR08G00380 N
MLOC_19933 Hordeum vulgare MLOC_19933 N
MLOC_53086 Hordeum vulgare MLOC_53086 I
MLOC_66083 Hordeum vulgare MLOC_66083 N
MLOC_67250 Hordeum vulgare MLOC_67250 N
OB08G10370 Oryza brachyantha OB08G10370 N
OBART08G00290 Oryza barthii OBART08G00290 N
OGLUM08G00350 Oryza glumaepatula OGLUM08G00350 N
OMERI08G00600 Oryza meridionalis OMERI08G00600 N
ONIVA08G00280 Oryza nivara ONIVA08G00280 N
OPUNC08G00360 Oryza punctata OPUNC08G00360 N
ORUFI08G00330 Oryza rufipogon ORUFI08G00330 N
OS08G0103900 Oryza sativa OS08G0103900 N
Pavir.Da02426 Panicum virgatum Pavir.Da02426 I
Pavir.J20890 Panicum virgatum Pavir.J20890 N
Pavir.J26987 Panicum virgatum Pavir.J26987 I
Pavir.J31179 Panicum virgatum Pavir.J31179 N
Sb06g034010 Sorghum bicolor Sb06g034010 N
Sb07g000470 Sorghum bicolor Sb07g000470 N
Sb10g000460 Sorghum bicolor Sb10g000460 I
SELMODRAFT_402243 Selaginella moellendorffii SELMODRAFT_402243 I
SELMODRAFT_408624 Selaginella moellendorffii SELMODRAFT_408624 I
Si006829m.g Setaria italica Si006829m.g I
Si014149m.g Setaria italica Si014149m.g N
Traes_2AL_61C5A2D03 Triticum aestivum Traes_2AL_61C5A2D03 N
Traes_2AL_8EE7F34F6 Triticum aestivum Traes_2AL_8EE7F34F6 N
Traes_2AL_C0670BBDD Triticum aestivum Traes_2AL_C0670BBDD N
Traes_2AL_CB84F42D2 Triticum aestivum Traes_2AL_CB84F42D2 N
Traes_2BL_0AED4E377 Triticum aestivum Traes_2BL_0AED4E377 N
Traes_2BL_CBFB7D720 Triticum aestivum Traes_2BL_CBFB7D720 N
Traes_2DL_607AD3522 Triticum aestivum Traes_2DL_607AD3522 N
Traes_4AL_F853C8660 Triticum aestivum Traes_4AL_F853C8660 I
Traes_7AS_6398221B7 Triticum aestivum Traes_7AS_6398221B7 I
Traes_7DL_DF64397D7 Triticum aestivum Traes_7DL_DF64397D7 N
Traes_7DS_7F0AF83B0 Triticum aestivum Traes_7DS_7F0AF83B0 I
TRIUR3_06372 Triticum urartu TRIUR3_06372 N
TRIUR3_08851 Triticum urartu TRIUR3_08851 I
TRIUR3_10969 Triticum urartu TRIUR3_10969 N
TRIUR3_10971 Triticum urartu TRIUR3_10971 N
TRIUR3_24878 Triticum urartu TRIUR3_24878 N
TRIUR3_24879 Triticum urartu TRIUR3_24879 N