SROB_0000565401 (Schistosoma rodhaini)
C2H2 ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00096 (zf-C2H2) IPR007087 SROB_0000565401 T156918_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
SP8
M02898_2.00 		Homo sapiens
VMCACBCCCMCH
DGKGGGVGTGKB		 SELEX
Jolma et al.(2013)
SP8_1 		0.757 0.783
SP8
M04517_2.00 		Homo sapiens
NMCMCGCCCMYH
DRKGGGCGKGKN		 SELEX
Yin et al.(2017)
SP8_eDBD_HT-SELEX 		0.757 0.783
SP9
M04645_2.00 		Homo sapiens
VMCMCGCCCMYH
DRKGGGCGKGKB		 SELEX
Yin et al.(2017)
SP9_eDBD_HT-SELEX 		0.757 0.783
SP8
M04518_2.00 		Homo sapiens
RHCACGCCCMYH
DRKGGGCGTGDY		 SELEX
Yin et al.(2017)
SP8_eDBD_Methyl-HT-SELEX 		0.757 0.783
SP9
M04646_2.00 		Homo sapiens
RYCACGCCCMYH
DRKGGGCGTGRY		 SELEX
Yin et al.(2017)
SP9_eDBD_Methyl-HT-SELEX 		0.757 0.783
For this family, TFs with SR scores > 0.755 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SROB_0000565401-mRNA-1 C2H2 ZF 449 471
SROB_0000565401-mRNA-1 C2H2 ZF 477 501
SROB_0000565401-mRNA-1 C2H2 ZF 507 529

Links

Other C2H2 ZF family TFs
Other Schistosoma rodhaini TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL018031 Aedes aegypti AAEL018031 I 0.767
AARA010383 Anopheles arabiensis AARA010383 I 0.780
AATE001783 Anopheles atroparvus AATE001783 I 0.780
ACOM036255 Anopheles coluzzii ACOM036255 I 0.780
ACUA015471 Anopheles culicifacies ACUA015471 I 0.780
ADAC005719 Anopheles darlingi ADAC005719 I 0.780
ADIR001426 Anopheles dirus ADIR001426 I 0.780
AEPI000653 Anopheles epiroticus AEPI000653 I 0.780
AFAF003469 Anopheles farauti AFAF003469 I 0.780
AFUN011446 Anopheles funestus AFUN011446 I 0.780
AGAP000674 Anopheles gambiae AGAP000674 I 0.780
Alligator_sinensis_CCG014455.1 Alligator sinensis Alligator_sinensis_CCG014455.1 I 0.766
AMAM012099 Anopheles maculatus AMAM012099 I 0.780
AMEC013887 Anopheles melas AMEC013887 I 0.780
AQUA005753 Anopheles quadriannulatus AQUA005753 I 0.780
ASIS015809 Anopheles sinensis ASIS015809 I 0.780
ASTEI01153 Anopheles stephensi ASTEI01153 I 0.780
A_07213 Schistosoma haematobium A_07213 I 0.808
CapteG224157 Capitella teleta CapteG224157 I 0.757
CapteG39158 Capitella teleta CapteG39158 I 0.761
CGI_10004780 Crassostrea gigas CGI_10004780 I 0.761
CGI_10007690 Crassostrea gigas CGI_10007690 I 0.757
Cmyd_10010806 Chelonia mydas Cmyd_10010806 I 0.757
Cmyd_10015831 Chelonia mydas Cmyd_10015831 I 0.766
CPIJ018448 Culex quinquefasciatus CPIJ018448 I 0.764
CpipJ_CPIJ018448 Culex pipiens CpipJ_CPIJ018448 I 0.764
csin113630 Clonorchis sinensis csin113630 I 0.792
D915_05674 Fasciola hepatica D915_05674 I 0.768
DAPPUDRAFT_106303 Daphnia pulex DAPPUDRAFT_106303 I 0.757
DAPPUDRAFT_114437 Daphnia pulex DAPPUDRAFT_114437 I 0.773
ECPE_0000615101 Echinostoma caproni ECPE_0000615101 I 0.771
SP6 Anolis carolinensis ENSACAG00000006831 I 0.766
ENSAMXG00000004709 Astyanax mexicanus ENSAMXG00000004709 I 0.757
ENSAMXG00000013057 Astyanax mexicanus ENSAMXG00000013057 I 0.757
ENSAMXG00000015246 Astyanax mexicanus ENSAMXG00000015246 I 0.757
ENSAMXG00000020011 Astyanax mexicanus ENSAMXG00000020011 I 0.757
SP8 Bos taurus ENSBTAG00000002604 I 0.757
SP9 Bos taurus ENSBTAG00000014949 I 0.757
SP8 Callithrix jacchus ENSCJAG00000001245 I 0.757
SP8 Cavia porcellus ENSCPOG00000026910 I 0.757
ENSCSAG00000013600 Chlorocebus sabaeus ENSCSAG00000013600 I 0.757
ENSCSAG00000014648 Chlorocebus sabaeus ENSCSAG00000014648 I 0.757
FO704755.1 Danio rerio ENSDARG00000005846 I 0.760
sp5l Danio rerio ENSDARG00000010124 I 0.757
sp8a Danio rerio ENSDARG00000011870 I 0.757
sp8b Danio rerio ENSDARG00000056666 I 0.757
sp9 Danio rerio ENSDARG00000099374 I 0.757
SP9 Dasypus novemcinctus ENSDNOG00000019150 I 0.757
SP8 Erinaceus europaeus ENSEEUG00000000621 I 0.757
SP8 Homo sapiens ENSG00000164651 D 0.757
SP9 Homo sapiens ENSG00000217236 D 0.757
SP9 Gasterosteus aculeatus ENSGACG00000004757 I 0.757
sp8b Gasterosteus aculeatus ENSGACG00000008062 I 0.757
sp5l Gasterosteus aculeatus ENSGACG00000008991 I 0.757
SP9 Gorilla gorilla ENSGGOG00000007345 I 0.757
ENSGMOG00000004393 Gadus morhua ENSGMOG00000004393 I 0.757
ENSGMOG00000004590 Gadus morhua ENSGMOG00000004590 I 0.757
ENSGMOG00000008078 Gadus morhua ENSGMOG00000008078 I 0.757
ENSLACG00000005288 Latimeria chalumnae ENSLACG00000005288 I 0.757
ENSLACG00000018513 Latimeria chalumnae ENSLACG00000018513 I 0.757
ENSLOCG00000007391 Lepisosteus oculatus ENSLOCG00000007391 I 0.757
ENSLOCG00000011486 Lepisosteus oculatus ENSLOCG00000011486 I 0.757
ENSMEUG00000012808 Macropus eugenii ENSMEUG00000012808 I 0.757
SP8 Macaca mulatta ENSMMUG00000003722 I 0.757
SP9 Macaca mulatta ENSMMUG00000023005 I 0.757
SP8 Monodelphis domestica ENSMODG00000001375 I 0.757
SP9 Monodelphis domestica ENSMODG00000009303 I 0.757
ENSMPUG00000013919 Mustela putorius furo ENSMPUG00000013919 I 0.757
Sp8 Mus musculus ENSMUSG00000048562 I 0.757
Sp9 Mus musculus ENSMUSG00000068859 I 0.757
ENSNLEG00000016729 Nomascus leucogenys ENSNLEG00000016729 I 0.757
SP9 Otolemur garnettii ENSOGAG00000034062 I 0.757
ENSONIG00000002896 Oreochromis niloticus ENSONIG00000002896 I 0.757
ENSONIG00000008657 Oreochromis niloticus ENSONIG00000008657 I 0.757
ENSONIG00000012117 Oreochromis niloticus ENSONIG00000012117 I 0.757
sp8b Oryzias latipes ENSORLG00000007242 I 0.757
sp5l Oryzias latipes ENSORLG00000007526 I 0.757
SP9 Oryzias latipes ENSORLG00000017492 I 0.757
ENSPANG00000016221 Papio anubis ENSPANG00000016221 I 0.757
ENSPANG00000023061 Papio anubis ENSPANG00000023061 I 0.757
SP9 Procavia capensis ENSPCAG00000012721 I 0.757
ENSPFOG00000007998 Poecilia formosa ENSPFOG00000007998 I 0.757
ENSPFOG00000008204 Poecilia formosa ENSPFOG00000008204 I 0.757
ENSPFOG00000013459 Poecilia formosa ENSPFOG00000013459 I 0.757
ENSPPYG00000017747 Pongo abelii ENSPPYG00000017747 I 0.757
SP8 Pan troglodytes ENSPTRG00000018968 I 0.757
SP8 Pteropus vampyrus ENSPVAG00000005109 I 0.757
Sp8 Rattus norvegicus ENSRNOG00000005943 I 0.757
Sp9 Rattus norvegicus ENSRNOG00000028187 I 0.757
ENSSSCG00000029407 Sus scrofa ENSSSCG00000029407 I 0.757
ENSSTOG00000028058 Ictidomys tridecemlineatus ENSSTOG00000028058 I 0.757
ENSTGUG00000002679 Taeniopygia guttata ENSTGUG00000002679 I 0.757
SP9 Tetraodon nigroviridis ENSTNIG00000016949 I 0.757
sp8b Tetraodon nigroviridis ENSTNIG00000018442 I 0.757
sp5l Takifugu rubripes ENSTRUG00000012835 I 0.757
sp8b Takifugu rubripes ENSTRUG00000015810 I 0.757
SP9 Takifugu rubripes ENSTRUG00000017609 I 0.757
SP8 Tursiops truncatus ENSTTRG00000013387 I 0.757
ENSXMAG00000005380 Xiphophorus maculatus ENSXMAG00000005380 I 0.757
ENSXMAG00000010161 Xiphophorus maculatus ENSXMAG00000010161 I 0.757
estExt_fgenesh2_pg.C_1820063 Branchiostoma floridae estExt_fgenesh2_pg.C_1820063 I 0.760
e_gw.339.61.1 Branchiostoma floridae e_gw.339.61.1 I 0.760
ISCW023685 Ixodes scapularis ISCW023685 I 0.757
L596_g19604 Steinernema carpocapsae L596_g19604 I 0.761
L889_g32073 Steinernema feltiae L889_g32073 I 0.761
L892_g17070 Steinernema scapterisci L892_g17070 I 0.761
L893_g2044 Steinernema glaseri L893_g2044 I 0.761
L898_g7955 Steinernema monticolum L898_g7955 I 0.765
LotgiG58417 Lottia gigantea LotgiG58417 I 0.757
NEMVEDRAFT_v1g27142 Nematostella vectensis NEMVEDRAFT_v1g27142 I 0.760
NEMVEDRAFT_v1g99612 Nematostella vectensis NEMVEDRAFT_v1g99612 I 0.761
Ocbimv22023102m.g Octopus bimaculoides Ocbimv22023102m.g I 0.760
Ocbimv22028510m.g Octopus bimaculoides Ocbimv22028510m.g I 0.757
Ocbimv22028516m.g Octopus bimaculoides Ocbimv22028516m.g I 0.757
Ogr12594 Ophisaurus gracilis Ogr12594 I 0.766
PPAI008544 Phlebotomus papatasi PPAI008544 I 0.782
Pvit_11839 Pogona vitticeps Pvit_11839 I 0.757
PXEA_0002750301 Protopolystoma xenopodis PXEA_0002750301 I 0.757
Sakowv30026942m.g Saccoglossus kowalevskii Sakowv30026942m.g I 0.757
Sakowv30026949m.g Saccoglossus kowalevskii Sakowv30026949m.g I 0.757
SCUD_0002146901 Schistosoma curassoni SCUD_0002146901 I 0.808
Sjc_0019150 Schistosoma japonicum Sjc_0019150 I 0.788
SMAR004861 Strigamia maritima SMAR004861 I 0.757
SMAR004954 Strigamia maritima SMAR004954 I 0.757
Smp_040390 Schistosoma mansoni Smp_040390 I 0.824
SMRZ_0001128801 Schistosoma margrebowiei SMRZ_0001128801 I 0.808
SMTD_0000803501 Schistosoma mattheei SMTD_0000803501 I 0.808
SPU_011280 Strongylocentrotus purpuratus SPU_011280 I 0.757
SPU_016114 Strongylocentrotus purpuratus SPU_016114 I 0.757
SPU_024189 Strongylocentrotus purpuratus SPU_024189 I 0.757
tetur22g00570 Tetranychus urticae tetur22g00570 I 0.757
TRE_0001792901 Trichobilharzia regenti TRE_0001792901 I 0.784
TriadG17488 Trichoplax adhaerens TriadG17488 I 0.757
sp5l Xenopus tropicalis XB-GENE-1000647 I 0.761
sp8.L Xenopus laevis XB-GENE-1216193 I 0.757
sp9 Xenopus tropicalis XB-GENE-5931012 I 0.757
sp5l.S Xenopus laevis XB-GENE-6485591 I 0.761
XP_002933331 Xenopus tropicalis XP_002933331 I 0.757
XP_002933332 Xenopus tropicalis XP_002933332 I 0.757
XP_002933333 Xenopus tropicalis XP_002933333 I 0.757