SMU15021651 (Schmidtea mediterranea)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 SMU15021651 T159523_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
SMU15021651 C2HC ZF 218 246
SMU15021651 C2HC ZF 259 287

Links

Other C2HC ZF family TFs
Other Schmidtea mediterranea TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
EIN3 Arabidopsis thaliana AT3G20770 D 0.000
Bo5g106280 Brassica oleracea Bo5g106280 I 0.000
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.000
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.000
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.000
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.000
Ca_07534 Cicer arietinum Ca_07534 I 0.000
Ca_10236 Cicer arietinum Ca_10236 I 0.000
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.000
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.000
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.000
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.000
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.000
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.000
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.000
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.000
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.000
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.000
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.000
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.000
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.000
Gorai.003G140600 Gossypium raimondii Gorai.003G140600 I 0.000
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.000
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.000
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.000
LjSGA_067101.1 Lotus japonicus LjSGA_067101.1 I 0.000
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.000
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.000
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.000
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.000
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.000
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.000
Pm017009 Prunus mume Pm017009 I 0.000
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.000
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.000
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.000
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.000
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.000
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.000
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.000
TCM_042022 Theobroma cacao TCM_042022 I 0.000
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.000
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.000