CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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HmN_000085400
(
Hymenolepis microstoma
)
C2HC ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01530 (zf-C2HC)
IPR002515
HmN_000085400
T159637_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HmN_000085400
C2HC ZF
173
201
RCPVPGCDGRSHSSGNYASHRSVSGCPKA
HmN_000085400
C2HC ZF
214
241
KCPTPGCDGSGHRTHNYTSHRTLSGCPL
Links
Other
C2HC ZF
family TFs
Other
Hymenolepis microstoma
TFs
17 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29889.m003258
Ricinus communis
29889.m003258
I
0.000
cassava34998.m1
Manihot esculenta
cassava34998.m1
I
0.000
evm.TU.supercontig_18.16
Carica papaya
evm.TU.supercontig_18.16
I
0.000
GRMZM2G051256
Zea mays
GRMZM2G051256
I
0.000
Pavir.Ea01343
Panicum virgatum
Pavir.Ea01343
I
0.000
Pavir.Eb01225
Panicum virgatum
Pavir.Eb01225
N
0.000
Sb03g012550
Sorghum bicolor
Sb03g012550
I
0.000
Si002107m.g
Setaria italica
Si002107m.g
I
0.000