NECAME_10938 (Necator americanus)
C2HC ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01530 (zf-C2HC) IPR002515 NECAME_10938 T159657_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ztf-11
M00650_2.00 		Caenorhabditis elegans
VAAGTTTN
NAAACTTB		 PBM
Narasimhan et al.(2015)
pTH9925 		0.947 0.947
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
NECAME_10938 C2HC ZF 82 109
NECAME_10938 C2HC ZF 128 156

Links

Other C2HC ZF family TFs
Other Necator americanus TFs

65 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AMTR_s00009p00242790 Amborella trichopoda AMTR_s00009p00242790 I 0.000
BHLH2 Arabidopsis thaliana AT1G63650 N 0.000
TT8 Arabidopsis thaliana AT4G09820 I 0.000
BHLH127 Arabidopsis thaliana AT4G28815 N 0.000
GL3 Arabidopsis thaliana AT5G41315 I 0.000
Bo4g141990 Brassica oleracea Bo4g141990 I 0.000
Bo9g029230 Brassica oleracea Bo9g029230 N 0.000
Bo9g086910 Brassica oleracea Bo9g086910 N 0.000
Bo9g086920 Brassica oleracea Bo9g086920 N 0.000
Bostr.25463s0338 Boechera stricta Bostr.25463s0338 I 0.000
Bostr.29223s0199 Boechera stricta Bostr.29223s0199 N 0.000
Bostr.7200s0145 Boechera stricta Bostr.7200s0145 I 0.000
Bra025508 Brassica rapa Bra025508 I 0.000
Bra027653 Brassica rapa Bra027653 N 0.000
Bra027796 Brassica rapa Bra027796 N 0.000
Bra037887 Brassica rapa Bra037887 N 0.000
Cagra.1664s0001 Capsella grandiflora Cagra.1664s0001 I 0.000
Cagra.2104s0007 Capsella grandiflora Cagra.2104s0007 N 0.000
Carubv10002462m.g Capsella rubella Carubv10002462m.g I 0.000
Carubv10004345m.g Capsella rubella Carubv10004345m.g I 0.000
Carubv10019965m.g Capsella rubella Carubv10019965m.g N 0.000
cassava8594.m1 Manihot esculenta cassava8594.m1 I 0.000
Ca_05750 Cicer arietinum Ca_05750 I 0.000
evm.TU.supercontig_537.2 Carica papaya evm.TU.supercontig_537.2 N 0.000
EGL3 Arabidopsis lyrata fgenesh2_kg.2__120__AT1G63650.2 N 0.000
TT8 Arabidopsis lyrata fgenesh2_kg.6__2968__AT4G09820.1 I 0.000
GL3 Arabidopsis lyrata fgenesh2_kg.7__3280__AT5G41315.1 I 0.000
gene32494-v1.0-hybrid Fragaria vesca gene32494-v1.0-hybrid I 0.000
GLYMA05G37770 Glycine max GLYMA05G37770 N 0.000
GLYMA08G01810 Glycine max GLYMA08G01810 I 0.000
Gorai.007G023500 Gossypium raimondii Gorai.007G023500 N 0.000
GSMUA_Achr11G21270_001 Musa acuminata GSMUA_Achr11G21270_001 I 0.000
LjSGA_008146.1 Lotus japonicus LjSGA_008146.1 I 0.000
mgf005803m Mimulus guttatus mgf005803m I 0.000
MTR_8g098275 Medicago truncatula MTR_8g098275 I 0.000
PK03576.1 Cannabis sativa PK03576.1 D 0.000
POPTR_0003s12810 Populus trichocarpa POPTR_0003s12810 I 0.000
PRUPE_ppa002762mg Prunus persica PRUPE_ppa002762mg I 0.000
SapurV1A.0612s0160 Salix purpurea SapurV1A.0612s0160 N 0.000
Sb06g016380 Sorghum bicolor Sb06g016380 N 0.000
TCM_016261 Theobroma cacao TCM_016261 I 0.000
Thhalv10023356m.g Eutrema salsugineum Thhalv10023356m.g N 0.000
Thhalv10027709m.g Eutrema salsugineum Thhalv10027709m.g I 0.000
VIT_02s0025g03450 Vitis vinifera VIT_02s0025g03450 N 0.000