GLYMA13G27230 (Glycine max)
CBF/NF-Y

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02045 (CBFB_NFYA) IPR001289 GLYMA13G27230 T160020_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
NFYA
M08104_2.00 		Homo sapiens
NSTGATTGGYB
VRCCAATCASN		 ChIP-seq
Mathelier et al.(2014)
MA0060.3 		0.714 0.714
NFYA
M09018_2.00 		Homo sapiens
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_HUMAN.H11MO.0.A 		0.714 0.714
Nfya
M09019_2.00 		Mus musculus
YKBYSATTGGYYRV
BYRRCCAATSRVMR		 Misc
Kulakovskiy et al.(2013)
NFYA_MOUSE.H11MO.0.A 		0.714 0.714
NFYA
M10403_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_02 		0.714 0.714
NFYA
M10404_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$NFYA_Q5 		0.714 0.714
NFYA
M10405_2.00 		Homo sapiens
NYTGATTGGYTAVH
DBTARCCAATCARN		 Transfac
Matys et al.(2006)
V$NFY_C 		0.714 0.714
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GLYMA13G27230.3 CBF/NF-Y 149 204
GLYMA13G27230.4 CBF/NF-Y 149 204

Links

Other CBF/NF-Y family TFs
Other Glycine max TFs

618 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
STOP1 Arabidopsis thaliana AT1G34370 D 0.000
BGIOSGA004888 Oryza indica BGIOSGA004888 I 0.000
Bo8g027000 Brassica oleracea Bo8g027000 I 0.000
Bostr.1040s0032 Boechera stricta Bostr.1040s0032 I 0.000
Bra040971 Brassica rapa Bra040971 I 0.000
BRADI2G56320 Brachypodium distachyon BRADI2G56320 I 0.000
Cagra.12398s0002 Capsella grandiflora Cagra.12398s0002 I 0.000
Carubv10008876m.g Capsella rubella Carubv10008876m.g I 0.000
cassava24483.valid.m1 Manihot esculenta cassava24483.valid.m1 I 0.000
Ca_04300 Cicer arietinum Ca_04300 I 0.000
Ciclev10000850m.g Citrus clementina Ciclev10000850m.g I 0.000
Cla016623 Citrullus lanatus Cla016623 I 0.000
Cucsa.079940 Cucumis sativus Cucsa.079940 I 0.000
Eucgr.F02627 Eucalyptus grandis Eucgr.F02627 I 0.000
F775_04088 Aegilops tauschii F775_04088 I 0.000
STOP1 Arabidopsis lyrata fgenesh2_kg.1__3547__AT1G34370.2 I 0.000
gene27486-v1.0-hybrid Fragaria vesca gene27486-v1.0-hybrid I 0.000
GLYMA10G35940 Glycine max GLYMA10G35940 I 0.000
GLYMA16G27280 Glycine max GLYMA16G27280 I 0.000
GLYMA20G31650 Glycine max GLYMA20G31650 I 0.000
Gorai.006G131700 Gossypium raimondii Gorai.006G131700 I 0.000
GRMZM2G075956 Zea mays GRMZM2G075956 I 0.000
GRMZM2G129428 Zea mays GRMZM2G129428 I 0.000
GSMUA_Achr5G01170_001 Musa acuminata GSMUA_Achr5G01170_001 I 0.000
LPERR01G33350 Leersia perrieri LPERR01G33350 I 0.000
LPERR03G34390 Leersia perrieri LPERR03G34390 I 0.000
Lus10009435.g Linum usitatissimum Lus10009435.g I 0.000
MDP0000141403 Malus domestica MDP0000141403 I 0.000
MDP0000199559 Malus domestica MDP0000199559 I 0.000
MDP0000453148 Malus domestica MDP0000453148 I 0.000
MDP0000551046 Malus domestica MDP0000551046 I 0.000
MDP0000807856 Malus domestica MDP0000807856 I 0.000
mgf000060m Mimulus guttatus mgf000060m I 0.000
MLOC_10987 Hordeum vulgare MLOC_10987 I 0.000
OB01G47470 Oryza brachyantha OB01G47470 I 0.000
OB03G47410 Oryza brachyantha OB03G47410 I 0.000
OBART01G38810 Oryza barthii OBART01G38810 I 0.000
OLONG_020555 Oryza longistaminata OLONG_020555 I 0.000
ONIVA01G43630 Oryza nivara ONIVA01G43630 I 0.000
OPUNC01G37530 Oryza punctata OPUNC01G37530 I 0.000
orange1.1g009831m.g Citrus sinensis orange1.1g009831m.g I 0.000
ORGLA01G0326400 Oryza glaberrima ORGLA01G0326400 I 0.000
ORUFI01G42150 Oryza rufipogon ORUFI01G42150 I 0.000
OS01G0871200 Oryza sativa OS01G0871200 I 0.000
Pavir.Ia00191 Panicum virgatum Pavir.Ia00191 I 0.000
Pavir.J01834 Panicum virgatum Pavir.J01834 I 0.000
Pavir.J06328 Panicum virgatum Pavir.J06328 I 0.000
Pavir.J12018 Panicum virgatum Pavir.J12018 I 0.000
Pavir.J14096 Panicum virgatum Pavir.J14096 I 0.000
PGSC0003DMG400009234 Solanum tuberosum PGSC0003DMG400009234 I 0.000
PGSC0003DMG400026081 Solanum tuberosum PGSC0003DMG400026081 I 0.000
PK23301.1 Cannabis sativa PK23301.1 I 0.000
Pm022201 Prunus mume Pm022201 I 0.000
POPTR_0019s11520 Populus trichocarpa POPTR_0019s11520 I 0.000
PRUPE_ppa004510mg Prunus persica PRUPE_ppa004510mg I 0.000
SapurV1A.0287s0150 Salix purpurea SapurV1A.0287s0150 I 0.000
SapurV1A.2334s0030 Salix purpurea SapurV1A.2334s0030 I 0.000
Sb01g001950 Sorghum bicolor Sb01g001950 I 0.000
Sb03g041170 Sorghum bicolor Sb03g041170 I 0.000
SELMODRAFT_48276 Selaginella moellendorffii SELMODRAFT_48276 N 0.000
SELMODRAFT_58353 Selaginella moellendorffii SELMODRAFT_58353 N 0.000
Si001053m.g Setaria italica Si001053m.g I 0.000
Si036555m.g Setaria italica Si036555m.g I 0.000
Solyc06g065440.1 Solanum lycopersicum Solyc06g065440.1 I 0.000
Solyc11g017140.1 Solanum lycopersicum Solyc11g017140.1 I 0.000
TCM_036719 Theobroma cacao TCM_036719 I 0.000
Thhalv10007411m.g Eutrema salsugineum Thhalv10007411m.g I 0.000
TRAES3BF044200110CFD_g Triticum aestivum TRAES3BF044200110CFD_g I 0.000
Traes_3AL_00FAACD5D Triticum aestivum Traes_3AL_00FAACD5D I 0.000
Traes_3DL_0284E68CC1 Triticum aestivum Traes_3DL_0284E68CC1 I 0.000
TRIUR3_13796 Triticum urartu TRIUR3_13796 I 0.000
STOP1 Vitis vinifera VIT_18s0072g00840 I 0.000