ENSCPOG00000013612 (Cavia porcellus)
CENPB

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04218 (CENP-B_N) IPR006695 ENSCPOG00000013612 T161398_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
TIGD2
M01206_2.00 		Monodelphis domestica
NNNRCGGWWR
YWWCCGYNNN		 PBM
Lambert et al.(2019)
pTH11439 		0.941 0.941
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCPOP00000012255 CENPB 4 54

Links

Other CENPB family TFs
Other Cavia porcellus TFs

50 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29830.m001444 Ricinus communis 29830.m001444 N
AMTR_s00044p00165760 Amborella trichopoda AMTR_s00044p00165760 N
AMTR_s00057p00091350 Amborella trichopoda AMTR_s00057p00091350 I
Aquca_015_00350 Aquilegia coerulea Aquca_015_00350 N
RKD5 Arabidopsis thaliana AT4G35590 N
Bo1g006340 Brassica oleracea Bo1g006340 N
Bostr.7867s1419 Boechera stricta Bostr.7867s1419 N
Bra011626 Brassica rapa Bra011626 N
Cagra.2350s0102 Capsella grandiflora Cagra.2350s0102 N
Carubv10005148m.g Capsella rubella Carubv10005148m.g N
chr2.CM0272.20.nd Lotus japonicus chr2.CM0272.20.nd N
Ciclev10027531m.g Citrus clementina Ciclev10027531m.g N
Cla014580 Citrullus lanatus Cla014580 N
Cucsa.044270 Cucumis sativus Cucsa.044270 N
fgenesh2_kg.7__520__AT4G35590.1 Arabidopsis lyrata fgenesh2_kg.7__520__AT4G35590.1 N
gene13055-v1.0-hybrid Fragaria vesca gene13055-v1.0-hybrid N
GLYMA01G36360 Glycine max GLYMA01G36360 N
GLYMA11G09080 Glycine max GLYMA11G09080 N
Gorai.003G002500 Gossypium raimondii Gorai.003G002500 N
GSMUA_Achr8G13370_001 Musa acuminata GSMUA_Achr8G13370_001 N
MDP0000125133 Malus domestica MDP0000125133 N
MDP0000192895 Malus domestica MDP0000192895 N
MDP0000215412 Malus domestica MDP0000215412 N
MDP0000291622 Malus domestica MDP0000291622 N
MTR_0140s0010 Medicago truncatula MTR_0140s0010 I
MTR_5g024070 Medicago truncatula MTR_5g024070 N
orange1.1g039420m.g Citrus sinensis orange1.1g039420m.g N
Pm026816 Prunus mume Pm026816 N
POPTR_0005s10400 Populus trichocarpa POPTR_0005s10400 N
PRUPE_ppa011563mg Prunus persica PRUPE_ppa011563mg N
SapurV1A.0085s0060 Salix purpurea SapurV1A.0085s0060 N
SELMODRAFT_73109 Selaginella moellendorffii SELMODRAFT_73109 N
SELMODRAFT_73110 Selaginella moellendorffii SELMODRAFT_73110 N
SELMODRAFT_73113 Selaginella moellendorffii SELMODRAFT_73113 N
TCM_000070 Theobroma cacao TCM_000070 N
Thhalv10027037m.g Eutrema salsugineum Thhalv10027037m.g N
VIT_04s0044g00060 Vitis vinifera VIT_04s0044g00060 N