Bra010875 (Brassica rapa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 Bra010875 T163034_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.771 0.771
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.743 0.743
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra010875.1-P CG-1 187 222

Links

Other CG-1 family TFs
Other Brassica rapa TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CMTA2 Arabidopsis thaliana AT5G64220 D 0.771
Bostr.0568s0382 Boechera stricta Bostr.0568s0382 I 0.771
Cagra.0248s0103 Capsella grandiflora Cagra.0248s0103 I 0.771
Carubv10025787m.g Capsella rubella Carubv10025787m.g I 0.771
scaffold_803130.1 Arabidopsis lyrata scaffold_803130.1 I 0.771