GSMUA_AchrUn_randomG08930_001 (Musa acuminata)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 GSMUA_AchrUn_randomG08930_001 T163225_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.833 0.833
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.816 0.816
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_AchrUn_randomP08930_001 CG-1 21 135

Links

Other CG-1 family TFs
Other Musa acuminata TFs

186 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ALUE_0001175901 Ascaris lumbricoides ALUE_0001175901 I 0.000
ANCCAN_16811 Ancylostoma caninum ANCCAN_16811 I 0.000
ASU_05171 Ascaris suum ASU_05171 I 0.000
CGI_10028547 Crassostrea gigas CGI_10028547 I 0.000
D918_01741 Trichuris suis D918_01741 I 0.000
DICVIV_04175 Dictyocaulus viviparus DICVIV_04175 I 0.000
ENSCING00000021968 Ciona intestinalis ENSCING00000021968 I 0.000
estExt_fgenesh2_pg.C_120005 Branchiostoma floridae estExt_fgenesh2_pg.C_120005 I 0.000
estExt_gwp.C_2760053 Branchiostoma floridae estExt_gwp.C_2760053 I 0.000
EVEC_0001151201 Enterobius vermicularis EVEC_0001151201 I 0.000
HCOI00086900 Haemonchus contortus HCOI00086900 I 0.000
HCOI00493700 Haemonchus contortus HCOI00493700 I 0.000
HPLM_0002138101 Haemonchus placei HPLM_0002138101 I 0.000
LOAG_09892 Loa loa LOAG_09892 I 0.000
maker-nMf.1.1.scaf00849-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf00849-augustus-gene-0.9 N 0.000
maker-nMf.1.1.scaf02270-augustus-gene-0.6 Meloidogyne floridensis maker-nMf.1.1.scaf02270-augustus-gene-0.6 N 0.000
maker-nMf.1.1.scaf03338-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf03338-augustus-gene-0.3 N 0.000
Minc16037 Meloidogyne incognita Minc16037 N 0.000
NBR_0000650501 Nippostrongylus brasiliensis NBR_0000650501 I 0.000
nLs.2.1.2.g05740 Litomosoides sigmodontis nLs.2.1.2.g05740 I 0.000
nRc.2.0.1.g44932 Romanomermis culicivorax nRc.2.0.1.g44932 I 0.000
PEQ_0000899501 Parascaris equorum PEQ_0000899501 I 0.000
PTRK_0000106800 Parastrongyloides trichosuri PTRK_0000106800 I 0.000
Sakowv30005248m.g Saccoglossus kowalevskii Sakowv30005248m.g I 0.000
SPAL_0001069200 Strongyloides papillosus SPAL_0001069200 I 0.000
SPU_018861 Strongylocentrotus purpuratus SPU_018861 I 0.000
SSTP_0000751800 Strongyloides stercoralis SSTP_0000751800 I 0.000
SVE_1651600 Strongyloides venezuelensis SVE_1651600 I 0.000
TMUE_s0249000200 Trichuris muris TMUE_s0249000200 I 0.000
TTRE_0000267601 Trichuris trichiura TTRE_0000267601 I 0.000