POPTR_0007s05410 (Populus trichocarpa)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF03859 (CG-1) IPR005559 POPTR_0007s05410 T163338_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		0.851 0.851
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.842 0.842
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.789 0.789
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0007s05410.1 CG-1 21 135
POPTR_0007s05410.2 CG-1 21 135

Links

Other CG-1 family TFs
Other Populus trichocarpa TFs

178 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005623 Calypte anna Aan_R005623 I 0.000
Aan_R006648 Calypte anna Aan_R006648 I 0.000
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I 0.000
Afo_R006642 Aptenodytes forsteri Afo_R006642 I 0.000
Afo_R014077 Aptenodytes forsteri Afo_R014077 I 0.000
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I 0.000
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I 0.000
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I 0.000
ALNC14_032570 Albugo laibachii ALNC14_032570 I 0.000
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I 0.000
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I 0.000
ASU_04096 Ascaris suum ASU_04096 I 0.000
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I 0.000
BGIBMGA007534 Bombyx mori BGIBMGA007534 I 0.000
Bm4234 Brugia malayi Bm4234 N 0.000
Brh_R005316 Buceros rhinoceros Brh_R005316 I 0.000
Brh_R011115 Buceros rhinoceros Brh_R011115 I 0.000
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I 0.000
CapteG198117 Capitella teleta CapteG198117 I 0.000
CBG00680 Caenorhabditis briggsae CBG00680 I 0.000
CBN23380 Caenorhabditis brenneri CBN23380 I 0.000
CGI_10023548 Crassostrea gigas CGI_10023548 I 0.000
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N 0.000
CJA26768 Caenorhabditis japonica CJA26768 I 0.000
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I 0.000
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I 0.000
CRE01589 Caenorhabditis remanei CRE01589 I 0.000
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I 0.000
DME_0000727201 Dracunculus medinensis DME_0000727201 I 0.000
E2F7 Anolis carolinensis ENSACAG00000005414 I 0.000
E2F8 Anolis carolinensis ENSACAG00000015743 I 0.000
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I 0.000
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I 0.000
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I 0.000
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I 0.000
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I 0.000
E2F7 Bos taurus ENSBTAG00000016931 I 0.000
E2F8 Bos taurus ENSBTAG00000017446 I 0.000
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I 0.000
ENSBTAP00000023190-D1 Bos grunniens ENSBTAP00000023190-D1 I 0.000
E2F7 Canis familiaris ENSCAFG00000005718 I 0.000
E2F8 Canis familiaris ENSCAFG00000009431 I 0.000
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I 0.000
E2F8 Callithrix jacchus ENSCJAG00000006811 I 0.000
E2F7 Callithrix jacchus ENSCJAG00000019162 I 0.000
E2F7 Cavia porcellus ENSCPOG00000007375 I 0.000
E2F8 Cavia porcellus ENSCPOG00000013766 I 0.000
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I 0.000
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I 0.000
e2f7 Danio rerio ENSDARG00000008986 I 0.000
e2f8 Danio rerio ENSDARG00000057323 I 0.000
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I 0.000
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I 0.000
E2f8 Dipodomys ordii ENSDORG00000000040 I 0.000
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I 0.000
E2F8 Equus caballus ENSECAG00000016457 I 0.000
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I 0.000
E2F8 Erinaceus europaeus ENSEEUG00000011472 I 0.000
E2F7 Echinops telfairi ENSETEG00000014750 I 0.000
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I 0.000
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I 0.000
E2F8 Felis catus ENSFCAG00000010706 I 0.000
E2F7 Felis catus ENSFCAG00000010756 I 0.000
E2F8 Homo sapiens ENSG00000129173 D 0.000
E2F7 Homo sapiens ENSG00000165891 D 0.000
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I 0.000
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I 0.000
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I 0.000
E2F7 Gorilla gorilla ENSGGOG00000012645 I 0.000
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I 0.000
ENSLACG00000014031 Latimeria chalumnae ENSLACG00000014031 I 0.000
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I 0.000
E2F7 Loxodonta africana ENSLAFG00000017902 I 0.000
E2F8 Loxodonta africana ENSLAFG00000022713 I 0.000
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I 0.000
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I 0.000
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I 0.000
E2F8 Meleagris gallopavo ENSMGAG00000002303 I 0.000
E2F7 Meleagris gallopavo ENSMGAG00000010943 I 0.000
E2F7 Myotis lucifugus ENSMLUG00000012116 I 0.000
E2F8 Myotis lucifugus ENSMLUG00000015592 I 0.000
E2F8 Macaca mulatta ENSMMUG00000010853 I 0.000
E2F7 Macaca mulatta ENSMMUG00000022846 I 0.000
E2F8 Monodelphis domestica ENSMODG00000009029 I 0.000
E2F7 Monodelphis domestica ENSMODG00000020465 I 0.000
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I 0.000
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I 0.000
E2f7 Mus musculus ENSMUSG00000020185 D 0.000
E2f8 Mus musculus ENSMUSG00000046179 I 0.000
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I 0.000
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I 0.000
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I 0.000
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I 0.000
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I 0.000
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I 0.000
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I 0.000
E2F8 Otolemur garnettii ENSOGAG00000005774 I 0.000
E2F7 Otolemur garnettii ENSOGAG00000010821 I 0.000
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I 0.000
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I 0.000
E2F7 Ochotona princeps ENSOPRG00000001896 I 0.000
E2F8 Ochotona princeps ENSOPRG00000012881 I 0.000
e2f8 Oryzias latipes ENSORLG00000000786 I 0.000
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I 0.000
ENSP00000323246 Macaca fascicularis ENSP00000323246 I 0.000
ENSP00000379463 Macaca fascicularis ENSP00000379463 I 0.000
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I 0.000
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I 0.000
E2F7 Procavia capensis ENSPCAG00000000596 I 0.000
E2F8 Procavia capensis ENSPCAG00000003996 I 0.000
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I 0.000
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I 0.000
ENSPMAG00000007204 Petromyzon marinus ENSPMAG00000007204 I 0.000
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I 0.000
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I 0.000
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I 0.000
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I 0.000
E2F8 Pan troglodytes ENSPTRG00000003435 I 0.000
E2F7 Pan troglodytes ENSPTRG00000005245 I 0.000
E2F7 Pteropus vampyrus ENSPVAG00000000288 I 0.000
E2F8 Pteropus vampyrus ENSPVAG00000012522 I 0.000
E2f8 Rattus norvegicus ENSRNOG00000022537 I 0.000
E2f7 Rattus norvegicus ENSRNOG00000026252 I 0.000
E2F7 Sorex araneus ENSSARG00000004122 I 0.000
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I 0.000
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I 0.000
E2F7 Sus scrofa ENSSSCG00000000950 I 0.000
E2F8 Sus scrofa ENSSSCG00000013352 I 0.000
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I 0.000
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I 0.000
E2F7 Tupaia belangeri ENSTBEG00000005417 I 0.000
E2F7 Taeniopygia guttata ENSTGUG00000007515 I 0.000
E2F8 Taeniopygia guttata ENSTGUG00000015857 I 0.000
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I 0.000
e2f7 Takifugu rubripes ENSTRUG00000001843 I 0.000
e2f8 Takifugu rubripes ENSTRUG00000015792 I 0.000
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I 0.000
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I 0.000
E2F7 Tursiops truncatus ENSTTRG00000000110 I 0.000
E2F8 Tursiops truncatus ENSTTRG00000005707 I 0.000
E2F7 Vicugna pacos ENSVPAG00000011151 I 0.000
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I 0.000
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I 0.000
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N 0.000
Gfo_R003950 Geospiza fortis Gfo_R003950 I 0.000
Gfo_R003976 Geospiza fortis Gfo_R003976 I 0.000
gw.270.22.1 Branchiostoma floridae gw.270.22.1 I 0.000
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I 0.000
HCOI01892600 Haemonchus contortus HCOI01892600 I 0.000
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I 0.000
ISCW021939 Ixodes scapularis ISCW021939 I 0.000
L596_g12895 Steinernema carpocapsae L596_g12895 I 0.000
L889_g28422 Steinernema feltiae L889_g28422 I 0.000
L892_g1818 Steinernema scapterisci L892_g1818 I 0.000
L893_g19965 Steinernema glaseri L893_g19965 I 0.000
L898_g3621 Steinernema monticolum L898_g3621 I 0.000
LOAG_07147 Loa loa LOAG_07147 N 0.000
LotgiG168338 Lottia gigantea LotgiG168338 I 0.000
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I 0.000
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I 0.000
Minc04041 Meloidogyne incognita Minc04041 I 0.000
Minc05731 Meloidogyne incognita Minc05731 I 0.000
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I 0.000
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I 0.000
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N 0.000
NECAME_17546 Necator americanus NECAME_17546 N 0.000
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N 0.000
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N 0.000
NV16280 Nasonia vitripennis NV16280 I 0.000
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I 0.000
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I 0.000
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I 0.000
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N 0.000
Ogr19156 Ophisaurus gracilis Ogr19156 I 0.000
PPA21298 Pristionchus pacificus PPA21298 I 0.000
Pvit_06409 Pogona vitticeps Pvit_06409 I 0.000
Pvit_10252 Pogona vitticeps Pvit_10252 I 0.000
Sakowv30003251m.g Saccoglossus kowalevskii Sakowv30003251m.g I 0.000
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I 0.000
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I 0.000
SMUV_0000434101 Syphacia muris SMUV_0000434101 I 0.000
SVUK_0001371201 Strongylus vulgaris SVUK_0001371201 I 0.000
Tal_R000495 Tyto alba Tal_R000495 I 0.000
Tal_R008430 Tyto alba Tal_R008430 I 0.000
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N 0.000
TCNE_0000873901 Toxocara canis TCNE_0000873901 I 0.000
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I 0.000
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I 0.000
efl-3 Caenorhabditis elegans WBGene00009899 I 0.000
WBGene00247952 Onchocerca volvulus WBGene00247952 N 0.000
WUBG_01805 Wuchereria bancrofti WUBG_01805 N 0.000
e2f7.L Xenopus laevis XB-GENE-1018449 I 0.000
e2f8.L Xenopus laevis XB-GENE-1219153 I 0.000
XP_002942881 Xenopus tropicalis XP_002942881 I 0.000