Bostr.5022s0003 (Boechera stricta)
CG-1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03859 (CG-1) IPR005559 Bostr.5022s0003 T163495_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CMTA3
M01900_2.00 		Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB		 PBM
Weirauch et al.(2014)
pTH8209 		1.000 1.000
CMTA2
M01901_2.00 		Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN		 PBM
Weirauch et al.(2014)
pTH7506 		0.798 0.798
EICBP.B
M06828_2.00 		Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH		 Dap-seq
OMalley et al.(2016)
CAMTA1_col_a 		0.781 0.781
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bostr.5022s0003.1.p CG-1 21 135

Links

Other CG-1 family TFs
Other Boechera stricta TFs

172 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R005623 Calypte anna Aan_R005623 I
Aan_R006648 Calypte anna Aan_R006648 I
ACAC_0000024001 Angiostrongylus cantonensis ACAC_0000024001 I
Afo_R006642 Aptenodytes forsteri Afo_R006642 I
Afo_R014077 Aptenodytes forsteri Afo_R014077 I
Alligator_sinensis_CCG013028.1 Alligator sinensis Alligator_sinensis_CCG013028.1 I
Alligator_sinensis_CCG013028.2 Alligator sinensis Alligator_sinensis_CCG013028.2 I
Alligator_sinensis_CCG013467.1 Alligator sinensis Alligator_sinensis_CCG013467.1 I
ALUE_0000773501 Ascaris lumbricoides ALUE_0000773501 I
ANCCAN_04600 Ancylostoma caninum ANCCAN_04600 I
ASIM_0001001801 Anisakis simplex ASIM_0001001801 I
ASU_04096 Ascaris suum ASU_04096 I
augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 Meloidogyne floridensis augustus_masked-nMf.1.1.scaf10944-processed-gene-0.0 I
BGIBMGA007534 Bombyx mori BGIBMGA007534 I
Bm4234 Brugia malayi Bm4234 N
Brh_R005316 Buceros rhinoceros Brh_R005316 I
Brh_R011115 Buceros rhinoceros Brh_R011115 I
BXY_1693900 Bursaphelenchus xylophilus BXY_1693900 I
CapteG198117 Capitella teleta CapteG198117 I
CBG00680 Caenorhabditis briggsae CBG00680 I
CGI_10023548 Crassostrea gigas CGI_10023548 I
CGOC_0000227901 Cylicostephanus goldi CGOC_0000227901 N
CJA26768 Caenorhabditis japonica CJA26768 I
Cmyd_10011734 Chelonia mydas Cmyd_10011734 I
Cmyd_10016427 Chelonia mydas Cmyd_10016427 I
CRE01589 Caenorhabditis remanei CRE01589 I
DICVIV_01764 Dictyocaulus viviparus DICVIV_01764 I
DME_0000727201 Dracunculus medinensis DME_0000727201 I
E2F7 Anolis carolinensis ENSACAG00000005414 I
E2F8 Anolis carolinensis ENSACAG00000015743 I
ENSAMEG00000007247 Ailuropoda melanoleuca ENSAMEG00000007247 I
ENSAMEG00000017950 Ailuropoda melanoleuca ENSAMEG00000017950 I
ENSAMXG00000016864 Astyanax mexicanus ENSAMXG00000016864 I
ENSAPLG00000009091 Anas platyrhynchos ENSAPLG00000009091 I
ENSAPLG00000014506 Anas platyrhynchos ENSAPLG00000014506 I
E2F7 Bos taurus ENSBTAG00000016931 I
ENSBTAP00000022518-D1 Bos grunniens ENSBTAP00000022518-D1 I
E2F7 Canis familiaris ENSCAFG00000005718 I
E2F8 Canis familiaris ENSCAFG00000009431 I
E2F8 Choloepus hoffmanni ENSCHOG00000006322 I
ENSCING00000014484 Ciona intestinalis ENSCING00000014484 I
E2F8 Callithrix jacchus ENSCJAG00000006811 I
E2F7 Callithrix jacchus ENSCJAG00000019162 I
E2F7 Cavia porcellus ENSCPOG00000007375 I
E2F8 Cavia porcellus ENSCPOG00000013766 I
ENSCSAG00000003998 Chlorocebus sabaeus ENSCSAG00000003998 I
ENSCSAG00000005093 Chlorocebus sabaeus ENSCSAG00000005093 I
e2f7 Danio rerio ENSDARG00000008986 I
e2f8 Danio rerio ENSDARG00000057323 I
E2F7 Dasypus novemcinctus ENSDNOG00000001580 I
E2F8 Dasypus novemcinctus ENSDNOG00000003349 I
E2f8 Dipodomys ordii ENSDORG00000000040 I
ENSDORG00000003404 Dipodomys ordii ENSDORG00000003404 I
E2F8 Equus caballus ENSECAG00000016457 I
ENSECAG00000017963 Equus caballus ENSECAG00000017963 I
E2F8 Erinaceus europaeus ENSEEUG00000011472 I
E2F7 Echinops telfairi ENSETEG00000014750 I
ENSFALG00000001625 Ficedula albicollis ENSFALG00000001625 I
ENSFALG00000010433 Ficedula albicollis ENSFALG00000010433 I
E2F8 Felis catus ENSFCAG00000010706 I
E2F7 Felis catus ENSFCAG00000010756 I
E2F8 Homo sapiens ENSG00000129173 D
E2F7 Homo sapiens ENSG00000165891 D
e2f8 Gasterosteus aculeatus ENSGACG00000017086 I
e2f7 Gasterosteus aculeatus ENSGACG00000019468 I
ENSGALG00000004023 Gallus gallus ENSGALG00000004023 I
ENSGALG00000010265 Gallus gallus ENSGALG00000010265 I
E2F7 Gorilla gorilla ENSGGOG00000012645 I
ENSGMOG00000019253 Gadus morhua ENSGMOG00000019253 I
ENSLACG00000016113 Latimeria chalumnae ENSLACG00000016113 I
E2F7 Loxodonta africana ENSLAFG00000017902 I
E2F8 Loxodonta africana ENSLAFG00000022713 I
ENSLOCG00000004831 Lepisosteus oculatus ENSLOCG00000004831 I
ENSLOCG00000016279 Lepisosteus oculatus ENSLOCG00000016279 I
ENSMEUG00000008461 Macropus eugenii ENSMEUG00000008461 I
E2F8 Meleagris gallopavo ENSMGAG00000002303 I
E2F7 Meleagris gallopavo ENSMGAG00000010943 I
E2F7 Myotis lucifugus ENSMLUG00000012116 I
E2F8 Myotis lucifugus ENSMLUG00000015592 I
E2F8 Macaca mulatta ENSMMUG00000010853 I
E2F7 Macaca mulatta ENSMMUG00000022846 I
E2F8 Monodelphis domestica ENSMODG00000009029 I
E2F7 Monodelphis domestica ENSMODG00000020465 I
ENSMPUG00000013899 Mustela putorius furo ENSMPUG00000013899 I
ENSMPUG00000017468 Mustela putorius furo ENSMPUG00000017468 I
E2f7 Mus musculus ENSMUSG00000020185 D
E2f8 Mus musculus ENSMUSG00000046179 I
ENSNLEG00000004897 Nomascus leucogenys ENSNLEG00000004897 I
ENSNLEG00000017803 Nomascus leucogenys ENSNLEG00000017803 I
E2F8 Ornithorhynchus anatinus ENSOANG00000011290 I
ENSOARG00000008807 Ovis aries ENSOARG00000008807 I
ENSOARG00000014941 Ovis aries ENSOARG00000014941 I
E2F8 Oryctolagus cuniculus ENSOCUG00000004485 I
E2F7 Oryctolagus cuniculus ENSOCUG00000004932 I
E2F8 Otolemur garnettii ENSOGAG00000005774 I
E2F7 Otolemur garnettii ENSOGAG00000010821 I
ENSONIG00000007135 Oreochromis niloticus ENSONIG00000007135 I
ENSONIG00000012070 Oreochromis niloticus ENSONIG00000012070 I
E2F7 Ochotona princeps ENSOPRG00000001896 I
e2f8 Oryzias latipes ENSORLG00000000786 I
ENSORLG00000012301 Oryzias latipes ENSORLG00000012301 I
ENSP00000323246 Macaca fascicularis ENSP00000323246 I
ENSP00000379463 Macaca fascicularis ENSP00000379463 I
ENSPANG00000004929 Papio anubis ENSPANG00000004929 I
ENSPANG00000005225 Papio anubis ENSPANG00000005225 I
E2F7 Procavia capensis ENSPCAG00000000596 I
ENSPFOG00000003272 Poecilia formosa ENSPFOG00000003272 I
ENSPMAG00000001858 Petromyzon marinus ENSPMAG00000001858 I
ENSPPYG00000003424 Pongo abelii ENSPPYG00000003424 I
ENSPPYG00000004791 Pongo abelii ENSPPYG00000004791 I
ENSPSIG00000008707 Pelodiscus sinensis ENSPSIG00000008707 I
ENSPSIG00000012629 Pelodiscus sinensis ENSPSIG00000012629 I
E2F8 Pan troglodytes ENSPTRG00000003435 I
E2F7 Pan troglodytes ENSPTRG00000005245 I
E2F7 Pteropus vampyrus ENSPVAG00000000288 I
E2F8 Pteropus vampyrus ENSPVAG00000012522 I
E2f8 Rattus norvegicus ENSRNOG00000022537 I
E2f7 Rattus norvegicus ENSRNOG00000026252 I
E2F7 Sorex araneus ENSSARG00000004122 I
ENSSHAG00000002919 Sarcophilus harrisii ENSSHAG00000002919 I
ENSSHAG00000018372 Sarcophilus harrisii ENSSHAG00000018372 I
E2F7 Sus scrofa ENSSSCG00000000950 I
E2F8 Sus scrofa ENSSSCG00000013352 I
ENSSTOG00000007887 Ictidomys tridecemlineatus ENSSTOG00000007887 I
ENSSTOG00000008838 Ictidomys tridecemlineatus ENSSTOG00000008838 I
E2F7 Tupaia belangeri ENSTBEG00000005417 I
E2F7 Taeniopygia guttata ENSTGUG00000007515 I
E2F8 Taeniopygia guttata ENSTGUG00000015857 I
e2f7 Tetraodon nigroviridis ENSTNIG00000005126 I
e2f8 Tetraodon nigroviridis ENSTNIG00000009615 I
e2f7 Takifugu rubripes ENSTRUG00000001843 I
e2f8 Takifugu rubripes ENSTRUG00000015792 I
ENSTSYG00000007279 Tarsius syrichta ENSTSYG00000007279 I
ENSTSYG00000008243 Tarsius syrichta ENSTSYG00000008243 I
E2F7 Tursiops truncatus ENSTTRG00000000110 I
E2F8 Tursiops truncatus ENSTTRG00000005707 I
E2F7 Vicugna pacos ENSVPAG00000011151 I
ENSXMAG00000006252 Xiphophorus maculatus ENSXMAG00000006252 I
ENSXMAG00000010237 Xiphophorus maculatus ENSXMAG00000010237 I
EVEC_0001263301 Enterobius vermicularis EVEC_0001263301 N
Gfo_R003950 Geospiza fortis Gfo_R003950 I
Gfo_R003976 Geospiza fortis Gfo_R003976 I
gw1.8.144.1 Ostreococcus RCC809 gw1.8.144.1 I
HCOI01892600 Haemonchus contortus HCOI01892600 I
HelroG187766 Helobdella robusta HelroG187766 I
HPBE_0000610601 Heligmosomoides bakeri HPBE_0000610601 I
ISCW021939 Ixodes scapularis ISCW021939 I
L596_g12895 Steinernema carpocapsae L596_g12895 I
L889_g28422 Steinernema feltiae L889_g28422 I
L892_g1818 Steinernema scapterisci L892_g1818 I
L893_g19965 Steinernema glaseri L893_g19965 I
L898_g3621 Steinernema monticolum L898_g3621 I
LOAG_07147 Loa loa LOAG_07147 N
LotgiG168338 Lottia gigantea LotgiG168338 I
maker-nMf.1.1.scaf01659-augustus-gene-0.9 Meloidogyne floridensis maker-nMf.1.1.scaf01659-augustus-gene-0.9 I
MhA1_Contig130.frz3.gene44 Meloidogyne hapla MhA1_Contig130.frz3.gene44 I
Minc04041 Meloidogyne incognita Minc04041 I
Minc05731 Meloidogyne incognita Minc05731 I
Myotis_brandtii_E2F7_10034114 Myotis brandtii Myotis_brandtii_E2F7_10034114 I
Myotis_brandtii_E2F8_10018668 Myotis brandtii Myotis_brandtii_E2F8_10018668 I
nDi.2.2.2.g08162 Dirofilaria immitis nDi.2.2.2.g08162 N
NECAME_17546 Necator americanus NECAME_17546 N
nLs.2.1.2.g03748 Litomosoides sigmodontis nLs.2.1.2.g03748 N
nOo.2.0.1.g06441 Onchocerca ochengi nOo.2.0.1.g06441 N
NV16280 Nasonia vitripennis NV16280 I
Ocbimv22037571m.g Octopus bimaculoides Ocbimv22037571m.g I
OESDEN_13289 Oesophagostomum dentatum OESDEN_13289 I
OESDEN_14635 Oesophagostomum dentatum OESDEN_14635 I
OFLC_0000212001 Onchocerca flexuosa OFLC_0000212001 N
Ogr19156 Ophisaurus gracilis Ogr19156 I
PPA21298 Pristionchus pacificus PPA21298 I
Pvit_06409 Pogona vitticeps Pvit_06409 I
Pvit_10252 Pogona vitticeps Pvit_10252 I
scaffold51-EXSNAP2012.35 Pristionchus exspectatus scaffold51-EXSNAP2012.35 I
scaffold884-EXSNAP2012.1 Pristionchus exspectatus scaffold884-EXSNAP2012.1 I
SELMODRAFT_421405 Selaginella moellendorffii SELMODRAFT_421405 I
SELMODRAFT_451530 Selaginella moellendorffii SELMODRAFT_451530 I
SMUV_0000434101 Syphacia muris SMUV_0000434101 I
Tal_R000495 Tyto alba Tal_R000495 I
Tal_R008430 Tyto alba Tal_R008430 I
TCLT_0000737401 Thelazia callipaeda TCLT_0000737401 N
TCNE_0000873901 Toxocara canis TCNE_0000873901 I
TELCIR_03927 Teladorsagia circumcincta TELCIR_03927 I
TELCIR_22846 Teladorsagia circumcincta TELCIR_22846 I
efl-3 Caenorhabditis elegans WBGene00009899 I
WBGene00247952 Onchocerca volvulus WBGene00247952 N
WUBG_01805 Wuchereria bancrofti WUBG_01805 N
e2f7.L Xenopus laevis XB-GENE-1018449 I
e2f8.L Xenopus laevis XB-GENE-1219153 I
XP_002942881 Xenopus tropicalis XP_002942881 I