CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ciclev10024764m.g
(
Citrus clementina
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03859 (CG-1)
IPR005559
Ciclev10024764m.g
T163510_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CMTA2
M01901_2.00
Arabidopsis thaliana
NNDVCGYGT
ACRCGBHNN
PBM
Weirauch et al.(2014)
pTH7506
0.851
0.851
CMTA3
M01900_2.00
Arabidopsis thaliana
VCGYGTNNN
NNNACRCGB
PBM
Weirauch et al.(2014)
pTH8209
0.833
0.833
EICBP.B
M06828_2.00
Arabidopsis thaliana
DARVCGCGTKDD
HHMACGCGBYTH
Dap-seq
OMalley et al.(2016)
CAMTA1_col_a
0.825
0.825
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ciclev10024764m
CG-1
21
135
EAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV
Ciclev10024771m
CG-1
21
135
EAQHRWLRPAEICEILRNYTKFRIAPESPHTPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKAGSVDVLHCYYAHGEENENFQRRSYWMLEEELSHIVLVHYREV
Links
Other
CG-1
family TFs
Other
Citrus clementina
TFs
177 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TVAG_004330
Trichomonas vaginalis
TVAG_004330
N
0.000
TVAG_006520
Trichomonas vaginalis
TVAG_006520
N
0.000
TVAG_015360
Trichomonas vaginalis
TVAG_015360
N
0.000
TVAG_018730
Trichomonas vaginalis
TVAG_018730
N
0.000
TVAG_022640
Trichomonas vaginalis
TVAG_022640
N
0.000
TVAG_022870
Trichomonas vaginalis
TVAG_022870
N
0.000
TVAG_023890
Trichomonas vaginalis
TVAG_023890
N
0.000
TVAG_025350
Trichomonas vaginalis
TVAG_025350
N
0.000
TVAG_030270
Trichomonas vaginalis
TVAG_030270
N
0.000
TVAG_030650
Trichomonas vaginalis
TVAG_030650
N
0.000
TVAG_045200
Trichomonas vaginalis
TVAG_045200
N
0.000
TVAG_051380
Trichomonas vaginalis
TVAG_051380
N
0.000
TVAG_055730
Trichomonas vaginalis
TVAG_055730
N
0.000
TVAG_057510
Trichomonas vaginalis
TVAG_057510
N
0.000
TVAG_058980
Trichomonas vaginalis
TVAG_058980
N
0.000
TVAG_065250
Trichomonas vaginalis
TVAG_065250
N
0.000
TVAG_065540
Trichomonas vaginalis
TVAG_065540
N
0.000
TVAG_069420
Trichomonas vaginalis
TVAG_069420
N
0.000
TVAG_075700
Trichomonas vaginalis
TVAG_075700
N
0.000
TVAG_077710
Trichomonas vaginalis
TVAG_077710
N
0.000
TVAG_078220
Trichomonas vaginalis
TVAG_078220
N
0.000
TVAG_081270
Trichomonas vaginalis
TVAG_081270
N
0.000
TVAG_084310
Trichomonas vaginalis
TVAG_084310
N
0.000
TVAG_085010
Trichomonas vaginalis
TVAG_085010
N
0.000
TVAG_086760
Trichomonas vaginalis
TVAG_086760
N
0.000
TVAG_092250
Trichomonas vaginalis
TVAG_092250
N
0.000
TVAG_095370
Trichomonas vaginalis
TVAG_095370
N
0.000
TVAG_096560
Trichomonas vaginalis
TVAG_096560
N
0.000
TVAG_109190
Trichomonas vaginalis
TVAG_109190
N
0.000
TVAG_117610
Trichomonas vaginalis
TVAG_117610
N
0.000
TVAG_117870
Trichomonas vaginalis
TVAG_117870
N
0.000
TVAG_128100
Trichomonas vaginalis
TVAG_128100
N
0.000
TVAG_129250
Trichomonas vaginalis
TVAG_129250
N
0.000
TVAG_131780
Trichomonas vaginalis
TVAG_131780
N
0.000
TVAG_133720
Trichomonas vaginalis
TVAG_133720
N
0.000
TVAG_138460
Trichomonas vaginalis
TVAG_138460
N
0.000
TVAG_141080
Trichomonas vaginalis
TVAG_141080
N
0.000
TVAG_141640
Trichomonas vaginalis
TVAG_141640
N
0.000
TVAG_152080
Trichomonas vaginalis
TVAG_152080
N
0.000
TVAG_152850
Trichomonas vaginalis
TVAG_152850
N
0.000
TVAG_155260
Trichomonas vaginalis
TVAG_155260
N
0.000
TVAG_155470
Trichomonas vaginalis
TVAG_155470
N
0.000
TVAG_172760
Trichomonas vaginalis
TVAG_172760
N
0.000
TVAG_173010
Trichomonas vaginalis
TVAG_173010
N
0.000
TVAG_181790
Trichomonas vaginalis
TVAG_181790
N
0.000
TVAG_181810
Trichomonas vaginalis
TVAG_181810
N
0.000
TVAG_189450
Trichomonas vaginalis
TVAG_189450
N
0.000
TVAG_194050
Trichomonas vaginalis
TVAG_194050
N
0.000
TVAG_199660
Trichomonas vaginalis
TVAG_199660
N
0.000
TVAG_202410
Trichomonas vaginalis
TVAG_202410
N
0.000
TVAG_208390
Trichomonas vaginalis
TVAG_208390
N
0.000
TVAG_209630
Trichomonas vaginalis
TVAG_209630
N
0.000
TVAG_210220
Trichomonas vaginalis
TVAG_210220
N
0.000
TVAG_218370
Trichomonas vaginalis
TVAG_218370
N
0.000
TVAG_230320
Trichomonas vaginalis
TVAG_230320
N
0.000
TVAG_231870
Trichomonas vaginalis
TVAG_231870
N
0.000
TVAG_233530
Trichomonas vaginalis
TVAG_233530
N
0.000
TVAG_236380
Trichomonas vaginalis
TVAG_236380
N
0.000
TVAG_241060
Trichomonas vaginalis
TVAG_241060
N
0.000
TVAG_255040
Trichomonas vaginalis
TVAG_255040
N
0.000
TVAG_264410
Trichomonas vaginalis
TVAG_264410
N
0.000
TVAG_269480
Trichomonas vaginalis
TVAG_269480
N
0.000
TVAG_269580
Trichomonas vaginalis
TVAG_269580
N
0.000
TVAG_272550
Trichomonas vaginalis
TVAG_272550
N
0.000
TVAG_278760
Trichomonas vaginalis
TVAG_278760
N
0.000
TVAG_279620
Trichomonas vaginalis
TVAG_279620
N
0.000
TVAG_285040
Trichomonas vaginalis
TVAG_285040
N
0.000
TVAG_304110
Trichomonas vaginalis
TVAG_304110
I
0.000
TVAG_307820
Trichomonas vaginalis
TVAG_307820
N
0.000
TVAG_317130
Trichomonas vaginalis
TVAG_317130
N
0.000
TVAG_331810
Trichomonas vaginalis
TVAG_331810
N
0.000
TVAG_332350
Trichomonas vaginalis
TVAG_332350
N
0.000
TVAG_346350
Trichomonas vaginalis
TVAG_346350
N
0.000
TVAG_348790
Trichomonas vaginalis
TVAG_348790
N
0.000
TVAG_349450
Trichomonas vaginalis
TVAG_349450
N
0.000
TVAG_353210
Trichomonas vaginalis
TVAG_353210
N
0.000
TVAG_355410
Trichomonas vaginalis
TVAG_355410
N
0.000
TVAG_355880
Trichomonas vaginalis
TVAG_355880
N
0.000
TVAG_355890
Trichomonas vaginalis
TVAG_355890
N
0.000
TVAG_356990
Trichomonas vaginalis
TVAG_356990
N
0.000
TVAG_357700
Trichomonas vaginalis
TVAG_357700
N
0.000
TVAG_361810
Trichomonas vaginalis
TVAG_361810
N
0.000
TVAG_364890
Trichomonas vaginalis
TVAG_364890
N
0.000
TVAG_366530
Trichomonas vaginalis
TVAG_366530
N
0.000
TVAG_366770
Trichomonas vaginalis
TVAG_366770
N
0.000
TVAG_367290
Trichomonas vaginalis
TVAG_367290
N
0.000
TVAG_368880
Trichomonas vaginalis
TVAG_368880
N
0.000
TVAG_370220
Trichomonas vaginalis
TVAG_370220
N
0.000
TVAG_376580
Trichomonas vaginalis
TVAG_376580
N
0.000
TVAG_377000
Trichomonas vaginalis
TVAG_377000
N
0.000
TVAG_377090
Trichomonas vaginalis
TVAG_377090
N
0.000
TVAG_381530
Trichomonas vaginalis
TVAG_381530
N
0.000
TVAG_382960
Trichomonas vaginalis
TVAG_382960
N
0.000
TVAG_385530
Trichomonas vaginalis
TVAG_385530
N
0.000
TVAG_400660
Trichomonas vaginalis
TVAG_400660
N
0.000
TVAG_401510
Trichomonas vaginalis
TVAG_401510
N
0.000
TVAG_405610
Trichomonas vaginalis
TVAG_405610
N
0.000
TVAG_418100
Trichomonas vaginalis
TVAG_418100
N
0.000
TVAG_424630
Trichomonas vaginalis
TVAG_424630
N
0.000
TVAG_425150
Trichomonas vaginalis
TVAG_425150
N
0.000
TVAG_433330
Trichomonas vaginalis
TVAG_433330
N
0.000
TVAG_437540
Trichomonas vaginalis
TVAG_437540
N
0.000
TVAG_438970
Trichomonas vaginalis
TVAG_438970
N
0.000
TVAG_439000
Trichomonas vaginalis
TVAG_439000
N
0.000
TVAG_439290
Trichomonas vaginalis
TVAG_439290
N
0.000
TVAG_440300
Trichomonas vaginalis
TVAG_440300
N
0.000
TVAG_449370
Trichomonas vaginalis
TVAG_449370
N
0.000
TVAG_450870
Trichomonas vaginalis
TVAG_450870
N
0.000
TVAG_454650
Trichomonas vaginalis
TVAG_454650
N
0.000
TVAG_458610
Trichomonas vaginalis
TVAG_458610
N
0.000
TVAG_469490
Trichomonas vaginalis
TVAG_469490
N
0.000
TVAG_472310
Trichomonas vaginalis
TVAG_472310
N
0.000
TVAG_474270
Trichomonas vaginalis
TVAG_474270
I
0.000
TVAG_484220
Trichomonas vaginalis
TVAG_484220
N
0.000
TVAG_484250
Trichomonas vaginalis
TVAG_484250
N
0.000
TVAG_488780
Trichomonas vaginalis
TVAG_488780
N
0.000
TVAG_499220
Trichomonas vaginalis
TVAG_499220
N
0.000
TVAG_500620
Trichomonas vaginalis
TVAG_500620
N
0.000
TVAG_511200
Trichomonas vaginalis
TVAG_511200
N
0.000
TVAG_513300
Trichomonas vaginalis
TVAG_513300
N
0.000
TVAG_514390
Trichomonas vaginalis
TVAG_514390
N
0.000
TVAG_517040
Trichomonas vaginalis
TVAG_517040
N
0.000
TVAG_520380
Trichomonas vaginalis
TVAG_520380
N
0.000
TVAG_521260
Trichomonas vaginalis
TVAG_521260
N
0.000
TVAG_521560
Trichomonas vaginalis
TVAG_521560
N
0.000
TVAG_527500
Trichomonas vaginalis
TVAG_527500
N
0.000
TVAG_534250
Trichomonas vaginalis
TVAG_534250
N
0.000
TVAG_538000
Trichomonas vaginalis
TVAG_538000
N
0.000
TVAG_540060
Trichomonas vaginalis
TVAG_540060
N
0.000
TVAG_540620
Trichomonas vaginalis
TVAG_540620
N
0.000
TVAG_552960
Trichomonas vaginalis
TVAG_552960
N
0.000
TVAG_559230
Trichomonas vaginalis
TVAG_559230
N
0.000
TVAG_559790
Trichomonas vaginalis
TVAG_559790
N
0.000
TVAG_565490
Trichomonas vaginalis
TVAG_565490
N
0.000
TVAG_571460
Trichomonas vaginalis
TVAG_571460
N
0.000
TVAG_571520
Trichomonas vaginalis
TVAG_571520
N
0.000
TVAG_575020
Trichomonas vaginalis
TVAG_575020
N
0.000
TVAG_579320
Trichomonas vaginalis
TVAG_579320
N
0.000
TVAG_579820
Trichomonas vaginalis
TVAG_579820
N
0.000
TVAG_581530
Trichomonas vaginalis
TVAG_581530
N
0.000
TVAG_584420
Trichomonas vaginalis
TVAG_584420
N
0.000
TVAG_586700
Trichomonas vaginalis
TVAG_586700
N
0.000
TVAG_593090
Trichomonas vaginalis
TVAG_593090
N
0.000
TVAG_595620
Trichomonas vaginalis
TVAG_595620
N
0.000
TVAG_596600
Trichomonas vaginalis
TVAG_596600
N
0.000
TVAG_597840
Trichomonas vaginalis
TVAG_597840
N
0.000