CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
Pavir.Gb01963
(
Panicum virgatum
)
CG-1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03859 (CG-1)
IPR005559
Pavir.Gb01963
T163578_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Pavir.Gb01963.1.p
CG-1
13
127
EARTRWLKPSEVYYILQNHERFPITYEAPKQPPSGSLFLYNRRVNRYFRRDGHTWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEKNPCFQRRCFWMLEPAYEHIVLVQYREV
Pavir.Gb01963.2.p
CG-1
13
127
EARTRWLKPSEVYYILQNHERFPITYEAPKQPPSGSLFLYNRRVNRYFRRDGHTWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEKNPCFQRRCFWMLEPAYEHIVLVQYREV
Pavir.Gb01963.3.p
CG-1
13
127
EARTRWLKPSEVYYILQNHERFPITYEAPKQPPSGSLFLYNRRVNRYFRRDGHTWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEKNPCFQRRCFWMLEPAYEHIVLVQYREV
Pavir.Gb01963.4.p
CG-1
13
127
EARTRWLKPSEVYYILQNHERFPITYEAPKQPPSGSLFLYNRRVNRYFRRDGHTWRRKKDGRTVGEAHERLKVGNVDALSCYYAHGEKNPCFQRRCFWMLEPAYEHIVLVQYREV
Links
Other
CG-1
family TFs
Other
Panicum virgatum
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
OIDMADRAFT_52514
Oidiodendron maius
OIDMADRAFT_52514
I
PaG_03436
Pseudozyma aphidis
PaG_03436
N
PAN0_012d4528
Pseudozyma antarctica
PAN0_012d4528
N
PFL1_05744
Pseudozyma flocculosa
PFL1_05744
N
PHSY_003590
Pseudozyma hubeiensis
PHSY_003590
N
sr15307
Sporisorium reilianum
sr15307
N
UHOR_06907
Ustilago hordei
UHOR_06907
N