CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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O9G_005146
(
Rozella allomycis
)
E2F
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02319 (E2F_TDP)
IPR003316
O9G_005146
T173303_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
E2f3
M00153_2.00
Mus musculus
NNNNGCGSNN
NNSCGCNNNN
PBM
Badis et al.(2009)
E2F3_3752
0.578
0.578
e_gw1.38.2.1
M01968_2.00
Physcomitrella patens
NSGCGCBHHN
NDDVGCGCSN
PBM
Weirauch et al.(2014)
pTH5707
0.578
0.578
estExt_gwp_gw1.C_220046
M01225_2.00
Physcomitrella patens
VGCGCBHHNN
NNDDVGCGCB
PBM
Lambert et al.(2019)
pTH9809
0.578
0.578
E2F3
M02956_2.00
Homo sapiens
RAAAAKGGCGCCAAAANN
NNTTTTGGCGCCMTTTTY
SELEX
Jolma et al.(2013)
E2F3_1
0.578
0.578
E2F3
M02957_2.00
Homo sapiens
DAAAADGGCGCCMWWTTY
RAAWWKGGCGCCHTTTTH
SELEX
Jolma et al.(2013)
E2F3_2
0.578
0.578
E2F3
M02958_2.00
Homo sapiens
NDTTTTGGCGCCAAAABH
DVTTTTGGCGCCAAAAHN
SELEX
Jolma et al.(2013)
E2F3_3
0.578
0.578
E2F3
M04701_2.00
Homo sapiens
DWTTTGGCGCCAAAWH
DWTTTGGCGCCAAAWH
SELEX
Yin et al.(2017)
E2F3_eDBD_HT-SELEX
0.578
0.578
E2FA
M06871_2.00
Arabidopsis thaliana
NDDDGGCGCCAWWW
WWWTGGCGCCHHHN
Dap-seq
OMalley et al.(2016)
E2FA_col_a
0.578
0.578
E2FA
M06872_2.00
Arabidopsis thaliana
DDWDGGCGCCAWAD
HTWTGGCGCCHWHH
Dap-seq
OMalley et al.(2016)
E2FA_colamp_a
0.578
0.578
E2FA
M08106_2.00
Arabidopsis thaliana
NVGCGCCAHN
NDTGGCGCBN
ChIP-seq
Mathelier et al.(2014)
MA1414.1
0.578
0.578
E2f
M08196_2.00
Drosophila melanogaster
AAWWBSSCGSCAA
TTGSCGSSVWWTT
ChIP-seq
Contrino et al.(2012)
Mf10
0.578
0.578
E2F3
M09031_2.00
Homo sapiens
NDGGCGGGAAR
YTTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F3_HUMAN.H11MO.0.A
0.578
0.578
E2f3
M09038_2.00
Mus musculus
DSGCGGGARV
BYTCCCGCSH
Misc
Kulakovskiy et al.(2013)
E2F3_MOUSE.H11MO.0.A
0.578
0.578
E2F3
M10454_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6_01
0.578
0.578
E2F3
M10455_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F3_Q6
0.578
0.578
E2F3
M04702_2.00
Homo sapiens
DTTTTGGCGCCAAAAH
DTTTTGGCGCCAAAAH
SELEX
Yin et al.(2017)
E2F3_eDBD_Methyl-HT-SELEX
0.578
0.578
E2F3
M01964_2.00
Taeniopygia guttata
NNSGCGCGMN
NKCGCGCSNN
PBM
Weirauch et al.(2014)
pTH9288
0.562
0.562
GSPATT00020286001
M01965_2.00
Paramecium tetraurelia
NNSGCGSBN
NVSCGCSNN
PBM
Weirauch et al.(2014)
pTH5647
0.547
0.547
E2FC
M06870_2.00
Arabidopsis thaliana
AWDDDGGCGCCAAAR
YTTTGGCGCCHHHWT
Dap-seq
OMalley et al.(2016)
E2FC_col_a
0.547
0.547
ENSACAG00000013716
M01960_2.00
Anolis carolinensis
HNVGCGCBND
HNVGCGCBND
PBM
Weirauch et al.(2014)
pTH9221
0.531
0.531
E2F2
M01961_2.00
Homo sapiens
DNSGCGCSNH
DNSGCGCSNH
PBM
Weirauch et al.(2014)
pTH9195
0.531
0.531
E2f2
M00154_2.00
Mus musculus
NDNNGCGSBN
NVSCGCNNHN
PBM
Badis et al.(2009)
E2F2_1022
0.531
0.531
ENSOANG00000014967
M01962_2.00
Ornithorhynchus anatinus
NDSGCGCSHN
NDSGCGCSHN
PBM
Weirauch et al.(2014)
pTH9382
0.531
0.531
E2F1
M02952_2.00
Homo sapiens
WWDGGCGCCAAW
WTTGGCGCCHWW
SELEX
Jolma et al.(2013)
E2F1_1
0.531
0.531
E2F1
M02953_2.00
Homo sapiens
WWKGGCGCCWWW
WWWGGCGCCMWW
SELEX
Jolma et al.(2013)
E2F1_2
0.531
0.531
E2F1
M02954_2.00
Homo sapiens
WWWKGGCGCCMWWW
WWWKGGCGCCMWWW
SELEX
Jolma et al.(2013)
E2F1_3
0.531
0.531
E2F1
M02955_2.00
Homo sapiens
AAWKGGCGCCAWTW
WAWTGGCGCCMWTT
SELEX
Jolma et al.(2013)
E2F1_4
0.531
0.531
E2F2
M02949_2.00
Homo sapiens
AAAAATGGCGCCAAAAWD
HWTTTTGGCGCCATTTTT
SELEX
Jolma et al.(2013)
E2F2_1
0.531
0.531
E2F2
M02950_2.00
Homo sapiens
VDTTTTGGCGCCAAAAHN
NDTTTTGGCGCCAAAAHB
SELEX
Jolma et al.(2013)
E2F2_2
0.531
0.531
E2F2
M02951_2.00
Homo sapiens
AAAWWGGCGCCAWTTT
AAAWTGGCGCCWWTTT
SELEX
Jolma et al.(2013)
E2F2_3
0.531
0.531
E2F4
M02961_2.00
Homo sapiens
AATGGCGCCAAA
TTTGGCGCCATT
SELEX
Jolma et al.(2013)
E2F4_1
0.531
0.531
E2F4
M02962_2.00
Homo sapiens
TTTGGCGCCAAA
TTTGGCGCCAAA
SELEX
Jolma et al.(2013)
E2F4_2
0.531
0.531
E2F1
M04700_2.00
Homo sapiens
NWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWN
SELEX
Yin et al.(2017)
E2F1_FL_HT-SELEX
0.531
0.531
E2F4
M04707_2.00
Homo sapiens
NWWKGGCGCCAAAW
WTTTGGCGCCMWWN
SELEX
Yin et al.(2017)
E2F4_eDBD_HT-SELEX
0.531
0.531
E2F2
M04696_2.00
Homo sapiens
GCGCGCGCSYW
WRSGCGCGCGC
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_1
0.531
0.531
E2F2
M04697_2.00
Homo sapiens
NDWWDGGCGCCWWHWN
NWDWWGGCGCCHWWHN
SELEX
Yin et al.(2017)
E2F2_eDBD_HT-SELEX_2
0.531
0.531
efl-1
M08110_2.00
Caenorhabditis elegans
HNHNSGCGSSAAWWN
NWWTTSSCGCSNDND
ChIP-seq
Mathelier et al.(2014)
MA0541.1
0.531
0.531
E2F4
M08109_2.00
Homo sapiens
NSGCGGGARVN
NBYTCCCGCSN
ChIP-seq
Mathelier et al.(2014)
MA0470.1
0.531
0.531
E2F1
M07938_2.00
Homo sapiens
VRRVNRVGCGSGMDS
SHKCSCGCBYNBYYB
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F1_UCD
0.531
0.531
E2F4
M07942_2.00
Homo sapiens
SGCGSGARDNNBNVN
NBNVNNHYTCSCGCS
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F4_UCD
0.531
0.531
E2F4
M07943_2.00
Homo sapiens
SGCGGGARDNNBVVN
NBBVNNHYTCCCGCS
ChIP-seq
Gerstein et al.(2012)
K562b_E2F4_UCD
0.531
0.531
efl-1
M08197_2.00
Caenorhabditis elegans
BGCGSSAAWW
WWTTSSCGCV
ChIP-seq
Contrino et al.(2012)
Mw140
0.531
0.531
E2F1
M09030_2.00
Homo sapiens
NVNDGGCGGGARVN
NBYTCCCGCCHNBN
Misc
Kulakovskiy et al.(2013)
E2F1_HUMAN.H11MO.0.A
0.531
0.531
E2F2
M09029_2.00
Homo sapiens
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_HUMAN.H11MO.0.B
0.531
0.531
E2F4
M09036_2.00
Homo sapiens
VDRGGCGGGRVND
HNBYCCCGCCYHB
Misc
Kulakovskiy et al.(2013)
E2F4_HUMAN.H11MO.0.A
0.531
0.531
E2f1
M09041_2.00
Mus musculus
NDDGGCGGGRVN
NBYCCCGCCHHN
Misc
Kulakovskiy et al.(2013)
E2F1_MOUSE.H11MO.0.A
0.531
0.531
E2f2
M09039_2.00
Mus musculus
GGCGCGMAWC
GWTKCGCGCC
Misc
Kulakovskiy et al.(2013)
E2F2_MOUSE.H11MO.0.B
0.531
0.531
E2f4
M09037_2.00
Mus musculus
NRDDGGCGGGRMNN
NNKYCCCGCCHHYN
Misc
Kulakovskiy et al.(2013)
E2F4_MOUSE.H11MO.0.A
0.531
0.531
efl-1
M09526_2.00
Caenorhabditis elegans
WGCAARYGCGCTCYA
TRGAGCGCRYTTGCW
Misc
Heinz et al.(2010)
cElegans-L1-EFL1_modEncode
0.531
0.531
E2F1
M09521_2.00
Homo sapiens
NNGGCGGGAA
TTCCCGCCNN
Misc
Heinz et al.(2010)
Hela-E2F1_GSE22478
0.531
0.531
E2F4
M09524_2.00
Homo sapiens
VGCGSGAADH
DHTTCSCGCB
Misc
Heinz et al.(2010)
K562-E2F4_GSE31477
0.531
0.531
E2F1
M10444_2.00
Homo sapiens
THVGCGCGAAAAHKR
YMDTTTTCGCGCBDA
Transfac
Matys et al.(2006)
V$E2F_01
0.531
0.531
E2F1
M10445_2.00
Homo sapiens
BHKSGCGCSAAA
TTTSGCGCSMDV
Transfac
Matys et al.(2006)
V$E2F_03
0.531
0.531
E2F1
M10446_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_01
0.531
0.531
E2F1
M10447_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_02
0.531
0.531
E2F1
M10448_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3_01
0.531
0.531
E2F1
M10449_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q3
0.531
0.531
E2F1
M10450_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_01
0.531
0.531
E2F1
M10451_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4_02
0.531
0.531
E2F1
M10452_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q4
0.531
0.531
E2F1
M10453_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F1_Q6
0.531
0.531
E2F4
M10457_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_05
0.531
0.531
E2F4
M10458_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q3
0.531
0.531
E2F4
M10459_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F4_Q6
0.531
0.531
E2F2
M04698_2.00
Homo sapiens
SGBGSGCGCGS
SCGCGCSCVCS
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_1
0.531
0.531
E2F2
M04699_2.00
Homo sapiens
DWWWDGGCGCCAAAWH
DWTTTGGCGCCHWWWH
SELEX
Yin et al.(2017)
E2F2_eDBD_Methyl-HT-SELEX_2
0.531
0.531
E2F2
M01963_2.00
Tupaia belangeri
WDVGCGCBHW
WDVGCGCBHW
PBM
Weirauch et al.(2014)
pTH9291
0.516
0.516
estExt_gwp_GeneWisePlus.C_Chr_02.00010270
M01969_2.00
Ostreococcus tauri
HRVGCGCCNN
NNGGCGCBYD
PBM
Weirauch et al.(2014)
pTH5701
0.516
0.516
E2f5
M09042_2.00
Mus musculus
NGCGCSAAAN
NTTTSGCGCN
Misc
Kulakovskiy et al.(2013)
E2F5_MOUSE.H11MO.0.B
0.516
0.516
E2F
M01959_2.00
Dictyostelium discoideum
NNGSGCGCSHN
NDSGCGCSCNN
PBM
Weirauch et al.(2014)
pTH5403
0.484
0.484
E2F6
M08107_2.00
Homo sapiens
DGGMGGGARVN
NBYTCCCKCCH
ChIP-seq
Mathelier et al.(2014)
MA0471.1
0.469
0.469
E2F6
M07939_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
HeLa-S3_E2F6_UCD
0.469
0.469
E2F6
M07940_2.00
Homo sapiens
NDVGCGGGARV
BYTCCCGCBHN
ChIP-seq
Gerstein et al.(2012)
K562b_E2F6_UCD
0.469
0.469
E2F6
M07941_2.00
Homo sapiens
NDSGCGGGARV
BYTCCCGCSHN
ChIP-seq
Gerstein et al.(2012)
K562_E2F6_HudsonAlpha
0.469
0.469
E2F6
M09034_2.00
Homo sapiens
NRGGMGGGARRNN
NNYYTCCCKCCYN
Misc
Kulakovskiy et al.(2013)
E2F6_HUMAN.H11MO.0.A
0.469
0.469
E2f6
M09043_2.00
Mus musculus
NDGGCGGGARVV
BBYTCCCGCCHN
Misc
Kulakovskiy et al.(2013)
E2F6_MOUSE.H11MO.0.A
0.469
0.469
E2F6
M09523_2.00
Homo sapiens
VGCGGGARNN
NNYTCCCGCB
Misc
Heinz et al.(2010)
Hela-E2F6_GSE31477
0.469
0.469
E2F6
M10456_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$E2F6_01
0.469
0.469
For this family, TFs with SR scores >
0.429
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
EPZ35609
E2F
42
105
TESSLGSLSKKFLNLIRQSPDGLVDLNQAAIQLGVAKRRIYDITNVMEGIGTLDKVGKNSVKYR
Links
Other
E2F
family TFs
Other
Rozella allomycis
TFs
946 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07437
Capronia coronata
A1O1_07437
I
A1O3_08281
Capronia epimyces
A1O3_08281
I
A1O5_04770
Cladophialophora psammophila
A1O5_04770
N
A1O9_02783
Exophiala aquamarina
A1O9_02783
I
ACRE_041000
Acremonium chrysogenum
ACRE_041000
I
AOL_s00004g659
Arthrobotrys oligospora
AOL_s00004g659
I
BAUCODRAFT_124151
Baudoinia compniacensis
BAUCODRAFT_124151
I
BBA_03181
Beauveria bassiana
BBA_03181
I
Bcin09g04000
Botrytis cinerea
Bcin09g04000
I
BDDG_05952
Blastomyces dermatitidis
BDDG_05952
I
BGHDH14_bgh05048
Blumeria graminis
BGHDH14_bgh05048
I
CCM_04849
Cordyceps militaris
CCM_04849
I
CFIO01_02960
Colletotrichum fioriniae
CFIO01_02960
I
CH063_07646
Colletotrichum higginsianum
CH063_07646
I
CHGG_06306
Chaetomium globosum
CHGG_06306
I
CMQ_5498
Grosmannia clavigera
CMQ_5498
I
Cob_05779
Colletotrichum orbiculare
Cob_05779
I
COCC4DRAFT_123864
Bipolaris maydis
COCC4DRAFT_123864
I
COCCADRAFT_81622
Bipolaris zeicola
COCCADRAFT_81622
I
COCMIDRAFT_103312
Bipolaris oryzae
COCMIDRAFT_103312
I
COCSADRAFT_207272
Bipolaris sorokiniana
COCSADRAFT_207272
I
COCVIDRAFT_91551
Bipolaris victoriae
COCVIDRAFT_91551
I
CPUR_04653
Claviceps purpurea
CPUR_04653
I
CSUB01_11666
Colletotrichum sublineola
CSUB01_11666
I
CTHT_0014240
Chaetomium thermophilum
CTHT_0014240
I
DOTSEDRAFT_68386
Dothistroma septosporum
DOTSEDRAFT_68386
I
EPUS_00352
Endocarpon pusillum
EPUS_00352
I
estExt_fgenesh1_pg.C_20162
Cochliobolus heterostrophus C5
estExt_fgenesh1_pg.C_20162
I
estExt_fgenesh3_kg.C_70245
Neurospora discreta
estExt_fgenesh3_kg.C_70245
I
EV44_g5656
Erysiphe necator
EV44_g5656
I
e_gw1.1.1014.1
Mycosphaerella fijiensis
e_gw1.1.1014.1
I
e_gw1.1.4254.1
Mycosphaerella graminicola
e_gw1.1.4254.1
I
F503_03886
Ophiostoma piceae uamh
F503_03886
I
FFUJ_04251
Fusarium fujikuroi
FFUJ_04251
I
fgenesh1_pg.sca_18_chr2_1_0000868
Nectria haematococca
fgenesh1_pg.sca_18_chr2_1_0000868
I
FGRRES_09410
Fusarium graminearum
FGRRES_09410
I
FOXG_06083
Fusarium oxysporum
FOXG_06083
I
FPSE_05112
Fusarium pseudograminearum
FPSE_05112
I
GGTG_10332
Gaeumannomyces graminis
GGTG_10332
I
GLRG_07822
Colletotrichum graminicola
GLRG_07822
I
GMDG_02388
Pseudogymnoascus destructans
GMDG_02388
I
GSTUM_00004702001
Tuber melanosporum
GSTUM_00004702001
I
HMPREF1120_04884
Exophiala dermatitidis
HMPREF1120_04884
I
HMPREF1541_04620
Cyphellophora europaea
HMPREF1541_04620
I
HMPREF1624_04682
Sporothrix schenckii
HMPREF1624_04682
I
LEMA_P041320.1
Leptosphaeria maculans
LEMA_P041320.1
I
M437DRAFT_48363
Aureobasidium melanogenum
M437DRAFT_48363
I
M438DRAFT_313334
Aureobasidium pullulans
M438DRAFT_313334
I
MAC_06655
Metarhizium acridum
MAC_06655
I
MAJ_03429
Metarhizium majus
MAJ_03429
I
MANI_000776
Metarhizium anisopliae
MANI_000776
I
MAPG_02496
Magnaporthe poae
MAPG_02496
I
MBM_06471
Marssonina brunnea
MBM_06471
I
MBR_06925
Metarhizium brunneum
MBR_06925
I
MGG_12536
Magnaporthe oryzae
MGG_12536
I
MPH_04617
Macrophomina phaseolina
MPH_04617
I
MYCFIDRAFT_209985
Pseudocercospora fijiensis
MYCFIDRAFT_209985
I
Mycgr3G31676
Zymoseptoria tritici
Mycgr3G31676
I
MYCTH_2297579
Myceliophthora thermophila
MYCTH_2297579
I
NCU03184
Neurospora crassa
NCU03184
D
NechaG76677
Fusarium solani
NechaG76677
I
NEUTE1DRAFT_126104
Neurospora tetrasperma
NEUTE1DRAFT_126104
I
OIDMADRAFT_115397
Oidiodendron maius
OIDMADRAFT_115397
I
PAAG_04503
Paracoccidioides sp lutzii
PAAG_04503
I
PABG_04286
Paracoccidioides brasiliensis
PABG_04286
I
PFICI_02997
Pestalotiopsis fici
PFICI_02997
I
PMAA_092990
Penicillium marneffei
PMAA_092990
I
PMAA_092990
Talaromyces marneffei
PMAA_092990
I
PTRG_05588
Pyrenophora triticirepentis
PTRG_05588
I
PTT_15591
Pyrenophora teres
PTT_15591
I
PV05_10243
Exophiala xenobiotica
PV05_10243
N
PV07_07040
Cladophialophora immunda
PV07_07040
N
PV07_12305
Cladophialophora immunda
PV07_12305
N
PV09_00302
Verruconis gallopava
PV09_00302
I
PV10_05881
Exophiala mesophila
PV10_05881
I
S40285_08790
Stachybotrys chlorohalonata
S40285_08790
I
S40288_04756
Stachybotrys chartarum
S40288_04756
I
SAPIO_CDS10068
Scedosporium apiospermum
SAPIO_CDS10068
I
SBOR_4818
Sclerotinia borealis
SBOR_4818
I
SEPMUDRAFT_77933
Sphaerulina musiva
SEPMUDRAFT_77933
I
SETTUDRAFT_125422
Setosphaeria turcica
SETTUDRAFT_125422
I
SMAC_02906
Sordaria macrospora
SMAC_02906
I
SNOG_07718
Stagonospora nodorum
SNOG_07718
I
SPBR_05957
Sporothrix brasiliensis
SPBR_05957
I
THITE_2112134
Thielavia terrestris
THITE_2112134
I
TRIATDRAFT_41152
Trichoderma atroviride
TRIATDRAFT_41152
I
TRIREDRAFT_4921
Trichoderma reesei
TRIREDRAFT_4921
I
TRIVIDRAFT_57749
Trichoderma virens
TRIVIDRAFT_57749
I
UCRNP2_8268
Neofusicoccum parvum
UCRNP2_8268
I
VDAG_01718
Verticillium dahliae
VDAG_01718
I
VDBG_01834
Verticillium alfalfae
VDBG_01834
I
VDBG_01834
Verticillium albo atrum
VDBG_01834
I
VHEMI06571
Torrubiella hemipterigena
VHEMI06571
I
W97_05560
Coniosporium apollinis
W97_05560
I
X797_008515
Metarhizium robertsii
X797_008515
I