Lus10032439.g (Linum usitatissimum)
E2F

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02319 (E2F_TDP) IPR003316 Lus10032439.g T173964_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
E2FE
M01958_2.00 		Arabidopsis thaliana
HDSGCGCSHD
HDSGCGCSHD		 PBM
Weirauch et al.(2014)
pTH8176 		0.824 0.824
E2FE
M06873_2.00 		Arabidopsis thaliana
TTTTGGCGGGAAAWWNWNDDN
NHHNWNWWTTTCCCGCCAAAA		 Dap-seq
OMalley et al.(2016)
DEL1_col_a 		0.824 0.824
E2FE
M06874_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL1_colamp_a 		0.824 0.824
E2FD
M06875_2.00 		Arabidopsis thaliana
DWWHDDTTTTGGCGGGAAAW
WTTTCCCGCCAAAAHHDWWH		 Dap-seq
OMalley et al.(2016)
DEL2_col_a 		0.669 0.669
E2FD
M06876_2.00 		Arabidopsis thaliana
DTTTTGGCGGGAAAA
TTTTCCCGCCAAAAH		 Dap-seq
OMalley et al.(2016)
DEL2_colamp_a 		0.669 0.669
E2FD
M10442_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L1_Q2 		0.669 0.669
E2FD
M10443_2.00 		Arabidopsis thaliana Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$E2L_Q2 		0.669 0.669
E2F7
M02960_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Jolma et al.(2013)
E2F7_1 		0.610 0.610
E2F7
M04705_2.00 		Homo sapiens
WTTTGGCGGGAAAN
NTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_HT-SELEX 		0.610 0.610
E2F7
M09033_2.00 		Homo sapiens
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_HUMAN.H11MO.0.B 		0.610 0.610
E2f7
M09040_2.00 		Mus musculus
NDGGCGGGRRNDV
BHNYYCCCGCCHN		 Misc
Kulakovskiy et al.(2013)
E2F7_MOUSE.H11MO.0.C 		0.610 0.610
E2F7
M09522_2.00 		Homo sapiens
NSGCGSGAAMNN
NNKTTCSCGCSN		 Misc
Heinz et al.(2010)
Hela-E2F7_GSE32673 		0.610 0.610
E2F7
M04706_2.00 		Homo sapiens
WTTTGGCGGGAAAH
DTTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F7_eDBD_Methyl-HT-SELEX 		0.610 0.610
E2F8
M02959_2.00 		Homo sapiens
TTTGGCGGGAAA
TTTCCCGCCAAA		 SELEX
Jolma et al.(2013)
E2F8_1 		0.588 0.588
E2F8
M04703_2.00 		Homo sapiens
WDKTGGCGGGARNN
NNYTCCCGCCAMHW		 SELEX
Yin et al.(2017)
E2F8_eDBD_HT-SELEX 		0.588 0.588
E2F8
M04704_2.00 		Homo sapiens
WTTTGGCGGGAAWN
NWTTCCCGCCAAAW		 SELEX
Yin et al.(2017)
E2F8_eDBD_Methyl-HT-SELEX 		0.588 0.588
For this family, TFs with SR scores > 0.429 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Lus10032439 E2F 21 85
Lus10032439 E2F 168 247

Links

Other E2F family TFs
Other Linum usitatissimum TFs

324 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL012662 Aedes aegypti AAEL012662 I
AALB000262 Anopheles albimanus AALB000262 I
AARA009464 Anopheles arabiensis AARA009464 I
AATE002862 Anopheles atroparvus AATE002862 I
ACHR010105 Anopheles christyi ACHR010105 I
ACOM040689 Anopheles coluzzii ACOM040689 I
ACUA018540 Anopheles culicifacies ACUA018540 I
ACYPI000273 Acyrthosiphon pisum ACYPI000273 I
ACYPI32959 Acyrthosiphon pisum ACYPI32959 I
ADIR000678 Anopheles dirus ADIR000678 I
AEPI003166 Anopheles epiroticus AEPI003166 I
AFAF012456 Anopheles farauti AFAF012456 I
AFUN009249 Anopheles funestus AFUN009249 I
AGAP028176 Anopheles gambiae AGAP028176 I
AMEC020491 Anopheles melas AMEC020491 I
AMEM000284 Anopheles merus AMEM000284 I
AMIN001682 Anopheles minimus AMIN001682 I
AQUA011502 Anopheles quadriannulatus AQUA011502 I
ASIS012186 Anopheles sinensis ASIS012186 I
ASTEI01901 Anopheles stephensi ASTEI01901 I
BGIBMGA007303 Bombyx mori BGIBMGA007303 I
BGLB006797 Biomphalaria glabrata BGLB006797 I
CapteG206308 Capitella teleta CapteG206308 I
Cflo_05077--XP_624468.1_APIME Camponotus floridanus Cflo_05077--XP_624468.1_APIME I
Cflo_09823--XP_001121050.1_APIME Camponotus floridanus Cflo_09823--XP_001121050.1_APIME I
CGI_10020332 Crassostrea gigas CGI_10020332 I
CLEC008492 Cimex lectularius CLEC008492 I
CLEC012303 Cimex lectularius CLEC012303 I
CPIJ010025 Culex quinquefasciatus CPIJ010025 I
CpipJ_CPIJ010025 Culex pipiens CpipJ_CPIJ010025 I
ENSAMXG00000025873 Astyanax mexicanus ENSAMXG00000025873 I
ENSXMAG00000014837 Xiphophorus maculatus ENSXMAG00000014837 I
estExt_fgenesh2_pg.C_2400032 Branchiostoma floridae estExt_fgenesh2_pg.C_2400032 I
dimm Drosophila melanogaster FBgn0023091 D
GA21247 Drosophila pseudoobscura FBgn0081235 I
GF14327 Drosophila ananassae FBgn0091354 I
GH13314 Drosophila grimshawi FBgn0120790 I
GI12220 Drosophila mojavensis FBgn0134977 I
GL26661 Drosophila persimilis FBgn0164242 I
GD24318 Drosophila simulans FBgn0195665 I
GJ17849 Drosophila virilis FBgn0205017 I
GK18738 Drosophila willistoni FBgn0220736 I
GE12913 Drosophila yakuba FBgn0230628 I
GB44356 Apis mellifera GB44356 I
GB47718 Apis mellifera GB47718 I
HHAL006119-PA Halyomorpha halys HHAL006119-PA I
HMEL004962 Heliconius melpomene HMEL004962 I
Hsal_02552--XP_001121050.1_APIME Harpegnathos saltator Hsal_02552--XP_001121050.1_APIME I
Hsal_06132--XP_001121050.1_APIME Harpegnathos saltator Hsal_06132--XP_001121050.1_APIME I
KGM_17543 Danaus plexippus KGM_17543 I
L798_11629 Zootermopsis nevadensis L798_11629 I
L798_12706 Zootermopsis nevadensis L798_12706 I
LCUP013558 Lucilia cuprina LCUP013558 I
LDEC018804 Leptinotarsa decemlineata LDEC018804 I
LotgiG98055 Lottia gigantea LotgiG98055 I
MCINX009496 Melitaea cinxia MCINX009496 I
MDOA007359 Musca domestica MDOA007359 I
MESCA005415 Megaselia scalaris MESCA005415 I
NV10548 Nasonia vitripennis NV10548 I
NV21702 Nasonia vitripennis NV21702 I
Ocbimv22004730m.g Octopus bimaculoides Ocbimv22004730m.g I
PHUM567140 Pediculus humanus PHUM567140 I
RPRC000986 Rhodnius prolixus RPRC000986 I
Sakowv30016776m.g Saccoglossus kowalevskii Sakowv30016776m.g I
SINV24225 Solenopsis invicta SINV24225 I
SMAR011224 Strigamia maritima SMAR011224 I
TC006222 Tribolium castaneum TC006222 I
tetur09g04370 Tetranychus urticae tetur09g04370 I
YQE_07035 Dendroctonus ponderosae YQE_07035 I