EBF4 (Echinops telfairi)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) ENSETEG00000015956 T174543_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.982 0.982
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.976 0.976
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.898 0.898
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.892 0.892
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.892 0.892
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.892 0.892
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.856 0.856
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.832 0.832
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSETEP00000012938 EBF1 1 177

Links

Other EBF1 family TFs
Other Echinops telfairi TFs

116 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Aan_R009520 Calypte anna Aan_R009520 I 0.704
ACAC_0000654401 Angiostrongylus cantonensis ACAC_0000654401 I 0.727
ACYPI060841 Acyrthosiphon pisum ACYPI060841 I 0.784
Afo_R003215 Aptenodytes forsteri Afo_R003215 I 0.856
AFUN004907 Anopheles funestus AFUN004907 I 0.714
Alligator_sinensis_CCG000599.1 Alligator sinensis Alligator_sinensis_CCG000599.1 I 0.736
ASTEI06455 Anopheles stephensi ASTEI06455 I 0.846
csin100403 Clonorchis sinensis csin100403 N 0.754
ENSACAG00000003052 Anolis carolinensis ENSACAG00000003052 I 0.762
ENSACAG00000007938 Anolis carolinensis ENSACAG00000007938 I 0.780
EBF3 Anolis carolinensis ENSACAG00000008590 I 0.892
ENSAMEG00000003291 Ailuropoda melanoleuca ENSAMEG00000003291 I 0.737
ENSAMEG00000011229 Ailuropoda melanoleuca ENSAMEG00000011229 I 0.706
ENSAMXG00000003402 Astyanax mexicanus ENSAMXG00000003402 I 0.886
ENSAPLG00000009260 Anas platyrhynchos ENSAPLG00000009260 I 0.856
EBF4 Bos taurus ENSBTAG00000037757 I 0.710
ENSBTAP00000042518-D1 Bos grunniens ENSBTAP00000042518-D1 I 0.774
EBF4 Canis familiaris ENSCAFG00000006631 I 0.710
ENSCING00000003209 Ciona intestinalis ENSCING00000003209 I 0.814
EBF4 Callithrix jacchus ENSCJAG00000021027 I 0.982
EBF4 Cavia porcellus ENSCPOG00000004862 I 0.799
ENSCSAG00000010974 Chlorocebus sabaeus ENSCSAG00000010974 I 0.782
ENSCSAVG00000000458 Ciona savignyi ENSCSAVG00000000458 I 0.820
ebf1b Danio rerio ENSDARG00000069196 I 0.886
si:ch211-51e8.2 Danio rerio ENSDARG00000092635 I 0.716
ENSDNOG00000036735 Dasypus novemcinctus ENSDNOG00000036735 I 0.715
EBF1 Equus caballus ENSECAG00000007964 I 0.743
EBF4 Equus caballus ENSECAG00000010003 I 0.706
EBF3 Echinops telfairi ENSETEG00000014060 I 0.892
ENSFALG00000011234 Ficedula albicollis ENSFALG00000011234 I 0.856
EBF1 Felis catus ENSFCAG00000008547 I 0.712
EBF4 Homo sapiens ENSG00000088881 D 0.710
ebf2 Gasterosteus aculeatus ENSGACG00000008451 I 0.844
ebf3a Gasterosteus aculeatus ENSGACG00000009548 I 0.898
EBF1 Gasterosteus aculeatus ENSGACG00000020458 I 0.886
EBF2 Gallus gallus ENSGALG00000000242 I 0.856
EBF4 Gorilla gorilla ENSGGOG00000015503 I 0.710
ENSGMOG00000012325 Gadus morhua ENSGMOG00000012325 I 1.000
ENSLACG00000001966 Latimeria chalumnae ENSLACG00000001966 I 0.749
ENSLACG00000017271 Latimeria chalumnae ENSLACG00000017271 I 0.844
ENSLACG00000017503 Latimeria chalumnae ENSLACG00000017503 I 0.722
EBF4 Loxodonta africana ENSLAFG00000006892 I 0.758
EBF1 Loxodonta africana ENSLAFG00000017522 I 0.886
EBF2 Meleagris gallopavo ENSMGAG00000000791 I 0.856
EBF1 Microcebus murinus ENSMICG00000010036 I 0.733
EBF2 Myotis lucifugus ENSMLUG00000011509 I 0.856
EBF4 Myotis lucifugus ENSMLUG00000023832 I 0.710
ENSMLUG00000025817 Myotis lucifugus ENSMLUG00000025817 I 0.725
ENSMODG00000016695 Monodelphis domestica ENSMODG00000016695 I 0.731
ENSMPUG00000009093 Mustela putorius furo ENSMPUG00000009093 I 0.710
Ebf4 Mus musculus ENSMUSG00000053552 D 0.976
ENSNLEG00000009110 Nomascus leucogenys ENSNLEG00000009110 I 0.782
ENSOANG00000005673 Ornithorhynchus anatinus ENSOANG00000005673 I 0.737
ENSOARG00000005967 Ovis aries ENSOARG00000005967 I 0.767
ENSOARG00000012916 Ovis aries ENSOARG00000012916 I 0.722
EBF4 Otolemur garnettii ENSOGAG00000004688 I 0.706
EBF4 Ochotona princeps ENSOPRG00000013703 I 0.807
ENSP00000347463-D1 Bos grunniens ENSP00000347463-D1 I 0.814
ENSP00000405003 Macaca fascicularis ENSP00000405003 I 0.982
ENSPANG00000007524 Papio anubis ENSPANG00000007524 I 0.722
EBF4 Procavia capensis ENSPCAG00000011947 I 0.837
ENSPFOG00000002559 Poecilia formosa ENSPFOG00000002559 I 0.892
ENSPFOG00000023105 Poecilia formosa ENSPFOG00000023105 I 0.728
ENSPMAG00000003301 Petromyzon marinus ENSPMAG00000003301 I 0.738
ENSPPYG00000010836 Pongo abelii ENSPPYG00000010836 I 0.710
ENSPTRG00000039291 Pan troglodytes ENSPTRG00000039291 I 0.871
EBF4 Pteropus vampyrus ENSPVAG00000006830 I 0.982
Ebf4 Rattus norvegicus ENSRNOG00000007408 I 0.780
Ebf1 Rattus norvegicus ENSRNOG00000028845 I 0.722
ENSSHAG00000017239 Sarcophilus harrisii ENSSHAG00000017239 I 0.934
EBF4 Sus scrofa ENSSSCG00000007171 I 0.808
ENSSSCG00000025433 Sus scrofa ENSSSCG00000025433 I 0.722
ENSSTOG00000006113 Ictidomys tridecemlineatus ENSSTOG00000006113 I 0.728
ENSSTOG00000026314 Ictidomys tridecemlineatus ENSSTOG00000026314 I 0.701
EBF2 Taeniopygia guttata ENSTGUG00000004267 I 0.856
ENSTNIG00000017063 Tetraodon nigroviridis ENSTNIG00000017063 I 0.737
ebf2 Takifugu rubripes ENSTRUG00000011528 I 0.838
EBF4 Tursiops truncatus ENSTTRG00000003459 I 0.976
ENSXMAG00000006633 Xiphophorus maculatus ENSXMAG00000006633 I 0.892
ENSXMAG00000017859 Xiphophorus maculatus ENSXMAG00000017859 I 0.838
GF11778 Drosophila ananassae FBgn0088818 I 0.838
GL10656 Drosophila persimilis FBgn0148266 I 0.832
GJ21945 Drosophila virilis FBgn0209060 I 0.820
GK23295 Drosophila willistoni FBgn0225257 I 0.832
GA24435 Drosophila pseudoobscura FBgn0245832 I 0.832
fgenesh2_pm.scaffold_381000001 Branchiostoma floridae fgenesh2_pm.scaffold_381000001 I 0.731
Gfo_R004859 Geospiza fortis Gfo_R004859 I 0.704
GPUH_0000007401 Gongylonema pulchrum GPUH_0000007401 I 0.845
HelroG112029 Helobdella robusta HelroG112029 I 0.838
HelroG143625 Helobdella robusta HelroG143625 I 0.750
HelroG147258 Helobdella robusta HelroG147258 I 0.755
ISCW021819 Ixodes scapularis ISCW021819 I 0.732
L889_g1820 Steinernema feltiae L889_g1820 I 0.814
L898_g8304 Steinernema monticolum L898_g8304 I 0.814
LotgiG225788 Lottia gigantea LotgiG225788 I 0.874
maker-nMf.1.1.scaf01942-snap-gene-0.10 Meloidogyne floridensis maker-nMf.1.1.scaf01942-snap-gene-0.10 I 0.728
MDOA011385 Musca domestica MDOA011385 I 0.826
Myotis_brandtii_Ebf2_10005809 Myotis brandtii Myotis_brandtii_Ebf2_10005809 I 0.701
Myotis_brandtii_EBF3_10024821 Myotis brandtii Myotis_brandtii_EBF3_10024821 I 0.714
Myotis_brandtii_EBF4_10032372 Myotis brandtii Myotis_brandtii_EBF4_10032372 I 0.756
nDi.2.2.2.g04990 Dirofilaria immitis nDi.2.2.2.g04990 I 0.832
nRc.2.0.1.g06532 Romanomermis culicivorax nRc.2.0.1.g06532 I 0.832
Ogr09591 Ophisaurus gracilis Ogr09591 I 0.701
Pvit_04283 Pogona vitticeps Pvit_04283 I 0.716
RPRC005513 Rhodnius prolixus RPRC005513 I 0.821
Sakowv30011013m.g Saccoglossus kowalevskii Sakowv30011013m.g I 0.701
SINV26263 Solenopsis invicta SINV26263 I 0.938
SMAR000842 Strigamia maritima SMAR000842 I 0.710
SMU15024001 Schmidtea mediterranea SMU15024001 I 0.790
SPU_004702 Strongylocentrotus purpuratus SPU_004702 I 0.856
T265_13606 Opisthorchis viverrini T265_13606 N 0.754
TRE_0001373801 Trichobilharzia regenti TRE_0001373801 I 0.717
ebf4 Xenopus tropicalis XB-GENE-6030626 I 0.892
ebf3 Xenopus tropicalis XB-GENE-962543 I 0.725
ebf2 Xenopus tropicalis XB-GENE-971136 I 0.832
ebf2.S Xenopus laevis XB-GENE-971141 I 0.820