SMAR000842 (Strigamia maritima)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF16422 (COE1_DBD) (none) SMAR000842 T174775_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.790 0.790
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.790 0.790
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.790 0.790
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.778 0.778
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.772 0.772
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.765 0.765
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.765 0.765
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.741 0.741
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SMAR000842-PA EBF1 32 194

Links

Other EBF1 family TFs
Other Strigamia maritima TFs

232 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACEP25962 Atta cephalotes ACEP25962 N 0.000
Alligator_sinensis_CCG004973.1 Alligator sinensis Alligator_sinensis_CCG004973.1 N 0.000
Brh_R012991 Buceros rhinoceros Brh_R012991 N 0.000
Cflo_11031--XP_001120115.1_APIME Camponotus floridanus Cflo_11031--XP_001120115.1_APIME N 0.000
CLEC001081 Cimex lectularius CLEC001081 N 0.000
Cmyd_10012613 Chelonia mydas Cmyd_10012613 N 0.000
ENSAPLG00000010567 Anas platyrhynchos ENSAPLG00000010567 N 0.000
ARID2 Bos taurus ENSBTAG00000011087 N 0.000
ARID2 Canis familiaris ENSCAFG00000009335 N 0.000
ENSCING00000006777 Ciona intestinalis ENSCING00000006777 N 0.000
ARID2 Callithrix jacchus ENSCJAG00000013099 N 0.000
ENSCSAG00000006749 Chlorocebus sabaeus ENSCSAG00000006749 N 0.000
ARID2 Dasypus novemcinctus ENSDNOG00000014939 N 0.000
Arid2 Dipodomys ordii ENSDORG00000012273 N 0.000
ARID2 Equus caballus ENSECAG00000019032 N 0.000
ARID2 Felis catus ENSFCAG00000012831 N 0.000
ARID2 Homo sapiens ENSG00000189079 N 0.000
ENSLACG00000005013 Latimeria chalumnae ENSLACG00000005013 N 0.000
ARID2 Loxodonta africana ENSLAFG00000004415 N 0.000
ENSLOCG00000016423 Lepisosteus oculatus ENSLOCG00000016423 N 0.000
ARID2 Microcebus murinus ENSMICG00000001487 N 0.000
ARID2 Myotis lucifugus ENSMLUG00000006908 N 0.000
ARID2 Macaca mulatta ENSMMUG00000015962 N 0.000
ENSMMUP00000020998 Macaca fascicularis ENSMMUP00000020998 N 0.000
ARID2 Monodelphis domestica ENSMODG00000018527 N 0.000
ENSMPUG00000000380 Mustela putorius furo ENSMPUG00000000380 N 0.000
Arid2 Mus musculus ENSMUSG00000033237 I 0.000
ENSNLEG00000017919 Nomascus leucogenys ENSNLEG00000017919 N 0.000
ENSOANG00000010834 Ornithorhynchus anatinus ENSOANG00000010834 N 0.000
ARID2 Otolemur garnettii ENSOGAG00000024418 N 0.000
ENSONIG00000011901 Oreochromis niloticus ENSONIG00000011901 N 0.000
arid2 Oryzias latipes ENSORLG00000009649 N 0.000
ENSP00000335044-D1 Bos grunniens ENSP00000335044-D1 N 0.000
ENSPANG00000015334 Papio anubis ENSPANG00000015334 N 0.000
ARID2 Procavia capensis ENSPCAG00000015312 N 0.000
ENSPFOG00000011270 Poecilia formosa ENSPFOG00000011270 N 0.000
ENSPMAG00000008289 Petromyzon marinus ENSPMAG00000008289 N 0.000
ARID2 Pan troglodytes ENSPTRG00000004853 N 0.000
ARID2 Pteropus vampyrus ENSPVAG00000009834 N 0.000
Arid2 Rattus norvegicus ENSRNOG00000004831 N 0.000
ARID2 Sorex araneus ENSSARG00000007415 N 0.000
ENSSSCG00000030685 Sus scrofa ENSSSCG00000030685 N 0.000
ENSSTOG00000008936 Ictidomys tridecemlineatus ENSSTOG00000008936 N 0.000
arid2 Tetraodon nigroviridis ENSTNIG00000005771 N 0.000
ENSTSYG00000008152 Tarsius syrichta ENSTSYG00000008152 N 0.000
ARID2 Vicugna pacos ENSVPAG00000004779 N 0.000
ENSXMAG00000006636 Xiphophorus maculatus ENSXMAG00000006636 N 0.000
fgenesh2_pg.scaffold_503000011 Branchiostoma floridae fgenesh2_pg.scaffold_503000011 I 0.000
HelroG195033 Helobdella robusta HelroG195033 N 0.000
Hsal_11764--XP_001120115.1_APIME Harpegnathos saltator Hsal_11764--XP_001120115.1_APIME N 0.000
ISCW014107 Ixodes scapularis ISCW014107 N 0.000
MDOA004973 Musca domestica MDOA004973 I 0.000
Myotis_brandtii_ARID2_10029493 Myotis brandtii Myotis_brandtii_ARID2_10029493 N 0.000
Ocbimv22031898m.g Octopus bimaculoides Ocbimv22031898m.g N 0.000
PHUM060660 Pediculus humanus PHUM060660 N 0.000
PTSG_01032 Salpingoeca rosetta PTSG_01032 I 0.000
RSKR_0000997500 Rhabditophanes kr3021 RSKR_0000997500 N 0.000
Sakowv30024145m.g Saccoglossus kowalevskii Sakowv30024145m.g N 0.000
SINV17530 Solenopsis invicta SINV17530 N 0.000
SPU_026159 Strongylocentrotus purpuratus SPU_026159 N 0.000
Tal_R007164 Tyto alba Tal_R007164 N 0.000