BTMF_0000305001 (Brugia timori)
EBF1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF16422 (COE1_DBD) (none) BTMF_0000305001 T174911_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
kn
M03721_2.00 		Drosophila melanogaster
BWATTCCCHDGGGAATWV
BWATTCCCHDGGGAATWV		 SELEX
Nitta et al.(2015)
kn_1 		0.941 0.941
Ebf2
M10467_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_01 		0.926 0.926
EBF2
M10466_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$COE2_02 		0.926 0.926
Ebf1
M09045_2.00 		Mus musculus
DBYCCCWRGGGAV
BTCCCYWGGGRVH		 Misc
Kulakovskiy et al.(2013)
COE1_MOUSE.H11MO.0.A 		0.912 0.912
Ebf1
M09527_2.00 		Mus musculus
DBTCCCHDGGGA
TCCCHDGGGAVH		 Misc
Heinz et al.(2010)
proBcell-EBF_GSE21978 		0.912 0.912
EBF3
M10461_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF_Q6 		0.912 0.912
Ebf1
M10469_2.00 		Mus musculus
VYMHVYYCYYBRGGGAVTHKHB
VDMDABTCCCYVRRGRRBDKRB		 Transfac
Matys et al.(2006)
V$OLF1_01 		0.912 0.912
Ebf4
M10468_2.00 		Mus musculus Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_01 		0.897 0.897
EBF4
M10460_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$EBF4_02 		0.897 0.897
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BTMF_0000305001-mRNA-1 EBF1 1 68

Links

Other EBF1 family TFs
Other Brugia timori TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
28428.m000040 Ricinus communis 28428.m000040 I 0.000
AC149818.2_FG009 Zea mays AC149818.2_FG009 I 0.000
Aquca_017_00693 Aquilegia coerulea Aquca_017_00693 I 0.000
Aquca_034_00400 Aquilegia coerulea Aquca_034_00400 I 0.000
LBD14 Arabidopsis thaliana AT2G31310 N 0.000
LBD17 Arabidopsis thaliana AT2G42440 N 0.000
LBD29 Arabidopsis thaliana AT3G58190 I 0.000
BGIOSGA005344 Oryza indica BGIOSGA005344 I 0.000
BGIOSGA011118 Oryza indica BGIOSGA011118 I 0.000
BGIOSGA011445 Oryza indica BGIOSGA011445 I 0.000
BGIOSGA026473 Oryza indica BGIOSGA026473 I 0.000
Bo4g016000 Brassica oleracea Bo4g016000 I 0.000
Bo4g052270 Brassica oleracea Bo4g052270 N 0.000
Bo4g108600 Brassica oleracea Bo4g108600 I 0.000
Bo4g191530 Brassica oleracea Bo4g191530 I 0.000
Bo4g191540 Brassica oleracea Bo4g191540 N 0.000
Bo8g092560 Brassica oleracea Bo8g092560 I 0.000
Bostr.20903s0070 Boechera stricta Bostr.20903s0070 I 0.000
Bostr.24513s0089 Boechera stricta Bostr.24513s0089 N 0.000
Bostr.25993s0537 Boechera stricta Bostr.25993s0537 I 0.000
Bostr.25993s0538 Boechera stricta Bostr.25993s0538 I 0.000
Bra004693 Brassica rapa Bra004693 I 0.000
Bra014581 Brassica rapa Bra014581 I 0.000
Bra016876 Brassica rapa Bra016876 N 0.000
Bra021737 Brassica rapa Bra021737 N 0.000
BRADI1G68170 Brachypodium distachyon BRADI1G68170 I 0.000
BRADI1G75110 Brachypodium distachyon BRADI1G75110 I 0.000
BRADI3G12550 Brachypodium distachyon BRADI3G12550 I 0.000
Cagra.0686s0036 Capsella grandiflora Cagra.0686s0036 I 0.000
Cagra.2636s0029 Capsella grandiflora Cagra.2636s0029 I 0.000
Cagra.6952s0010 Capsella grandiflora Cagra.6952s0010 N 0.000
Carubv10019250m.g Capsella rubella Carubv10019250m.g I 0.000
Carubv10025067m.g Capsella rubella Carubv10025067m.g N 0.000
Carubv10025548m.g Capsella rubella Carubv10025548m.g I 0.000
cassava28659.m1 Manihot esculenta cassava28659.m1 I 0.000
cassava40664.m1 Manihot esculenta cassava40664.m1 I 0.000
cassava41632.m1 Manihot esculenta cassava41632.m1 I 0.000
Ca_07763 Cicer arietinum Ca_07763 I 0.000
Ca_12214 Cicer arietinum Ca_12214 I 0.000
Ciclev10023341m.g Citrus clementina Ciclev10023341m.g I 0.000
Cla006087 Citrullus lanatus Cla006087 I 0.000
Cla015094 Citrullus lanatus Cla015094 I 0.000
Cucsa.053450 Cucumis sativus Cucsa.053450 I 0.000
Cucsa.388160 Cucumis sativus Cucsa.388160 I 0.000
Eucgr.B01529 Eucalyptus grandis Eucgr.B01529 I 0.000
evm.TU.supercontig_50.42 Carica papaya evm.TU.supercontig_50.42 I 0.000
evm.TU.supercontig_50.43 Carica papaya evm.TU.supercontig_50.43 I 0.000
F775_02052 Aegilops tauschii F775_02052 I 0.000
F775_22967 Aegilops tauschii F775_22967 I 0.000
fgenesh1_pg.C_scaffold_4002383 Arabidopsis lyrata fgenesh1_pg.C_scaffold_4002383 N 0.000
LBD29 Arabidopsis lyrata fgenesh2_kg.5__2263__AT3G58190.1 I 0.000
gene08253-v1.0-hybrid Fragaria vesca gene08253-v1.0-hybrid I 0.000
gene08254-v1.0-hybrid Fragaria vesca gene08254-v1.0-hybrid I 0.000
GLYMA03G31860 Glycine max GLYMA03G31860 I 0.000
GLYMA10G04050 Glycine max GLYMA10G04050 I 0.000
GLYMA13G18210 Glycine max GLYMA13G18210 I 0.000
GLYMA19G30200 Glycine max GLYMA19G30200 I 0.000
GLYMA19G34600 Glycine max GLYMA19G34600 I 0.000
Gorai.001G251700 Gossypium raimondii Gorai.001G251700 I 0.000
Gorai.004G073200 Gossypium raimondii Gorai.004G073200 I 0.000
Gorai.004G073300 Gossypium raimondii Gorai.004G073300 I 0.000
Gorai.004G220000 Gossypium raimondii Gorai.004G220000 I 0.000
Gorai.007G144500 Gossypium raimondii Gorai.007G144500 I 0.000
GRMZM2G075499 Zea mays GRMZM2G075499 I 0.000
GRMZM2G092542 Zea mays GRMZM2G092542 I 0.000
GRMZM2G110913 Zea mays GRMZM2G110913 I 0.000
GRMZM2G150594 Zea mays GRMZM2G150594 I 0.000
GSMUA_Achr10G06700_001 Musa acuminata GSMUA_Achr10G06700_001 I 0.000
GSMUA_Achr11G02110_001 Musa acuminata GSMUA_Achr11G02110_001 I 0.000
GSMUA_Achr1G01350_001 Musa acuminata GSMUA_Achr1G01350_001 I 0.000
GSMUA_Achr1G01360_001 Musa acuminata GSMUA_Achr1G01360_001 I 0.000
GSMUA_Achr1G02520_001 Musa acuminata GSMUA_Achr1G02520_001 I 0.000
GSMUA_Achr1G06580_001 Musa acuminata GSMUA_Achr1G06580_001 I 0.000
GSMUA_Achr4G25190_001 Musa acuminata GSMUA_Achr4G25190_001 I 0.000
GSMUA_Achr8G14330_001 Musa acuminata GSMUA_Achr8G14330_001 I 0.000
GSMUA_AchrUn_randomG07730_001 Musa acuminata GSMUA_AchrUn_randomG07730_001 I 0.000
GSMUA_AchrUn_randomG23710_001 Musa acuminata GSMUA_AchrUn_randomG23710_001 I 0.000
gw1.190.59.1 Physcomitrella patens gw1.190.59.1 I 0.000
LjT35F15.90.nd Lotus japonicus LjT35F15.90.nd I 0.000
LPERR02G31040 Leersia perrieri LPERR02G31040 I 0.000
LPERR03G03470 Leersia perrieri LPERR03G03470 I 0.000
LPERR03G09330 Leersia perrieri LPERR03G09330 I 0.000
LPERR08G20530 Leersia perrieri LPERR08G20530 I 0.000
Lus10000613.g Linum usitatissimum Lus10000613.g I 0.000
Lus10033873.g Linum usitatissimum Lus10033873.g I 0.000
mgf020773m Mimulus guttatus mgf020773m I 0.000
MLOC_10784 Hordeum vulgare MLOC_10784 I 0.000
MLOC_52276 Hordeum vulgare MLOC_52276 I 0.000
MLOC_61947 Hordeum vulgare MLOC_61947 I 0.000
MTR_1g070205 Medicago truncatula MTR_1g070205 I 0.000
MTR_7g096610 Medicago truncatula MTR_7g096610 I 0.000
OB02G44330 Oryza brachyantha OB02G44330 I 0.000
OB03G13890 Oryza brachyantha OB03G13890 I 0.000
OB08G30680 Oryza brachyantha OB08G30680 I 0.000
OBART03G03830 Oryza barthii OBART03G03830 I 0.000
OBART03G10450 Oryza barthii OBART03G10450 I 0.000
OBART08G23860 Oryza barthii OBART08G23860 I 0.000
OGLUM02G38740 Oryza glumaepatula OGLUM02G38740 I 0.000
OGLUM03G03710 Oryza glumaepatula OGLUM03G03710 I 0.000
OGLUM03G10340 Oryza glumaepatula OGLUM03G10340 I 0.000
OGLUM08G25340 Oryza glumaepatula OGLUM08G25340 I 0.000
OLONG_001985 Oryza longistaminata OLONG_001985 I 0.000
OLONG_010223 Oryza longistaminata OLONG_010223 I 0.000
OLONG_020841 Oryza longistaminata OLONG_020841 I 0.000
OMERI02G35350 Oryza meridionalis OMERI02G35350 I 0.000
OMERI03G09680 Oryza meridionalis OMERI03G09680 I 0.000
OMERI07G01660 Oryza meridionalis OMERI07G01660 I 0.000
OMERI08G18670 Oryza meridionalis OMERI08G18670 I 0.000
ONIVA02G40360 Oryza nivara ONIVA02G40360 I 0.000
ONIVA03G03580 Oryza nivara ONIVA03G03580 I 0.000
ONIVA09G01330 Oryza nivara ONIVA09G01330 I 0.000
OPUNC02G34750 Oryza punctata OPUNC02G34750 I 0.000
OPUNC03G03520 Oryza punctata OPUNC03G03520 I 0.000
OPUNC03G10080 Oryza punctata OPUNC03G10080 I 0.000
OPUNC08G21770 Oryza punctata OPUNC08G21770 I 0.000
orange1.1g027399m.g Citrus sinensis orange1.1g027399m.g I 0.000
ORGLA02G0327800 Oryza glaberrima ORGLA02G0327800 I 0.000
ORGLA03G0035900 Oryza glaberrima ORGLA03G0035900 I 0.000
ORGLA03G0100400 Oryza glaberrima ORGLA03G0100400 I 0.000
ORGLA08G0192400 Oryza glaberrima ORGLA08G0192400 I 0.000
ORUFI02G39110 Oryza rufipogon ORUFI02G39110 I 0.000
ORUFI03G03550 Oryza rufipogon ORUFI03G03550 I 0.000
ORUFI03G10670 Oryza rufipogon ORUFI03G10670 I 0.000
ORUFI08G26340 Oryza rufipogon ORUFI08G26340 I 0.000
OS02G0820500 Oryza sativa OS02G0820500 I 0.000
OS03G0149100 Oryza sativa OS03G0149100 I 0.000
OS03G0246900 Oryza sativa OS03G0246900 I 0.000
OS08G0563400 Oryza sativa OS08G0563400 I 0.000
Pavir.Aa00097 Panicum virgatum Pavir.Aa00097 I 0.000
Pavir.Fa00011 Panicum virgatum Pavir.Fa00011 I 0.000
Pavir.Ia04220 Panicum virgatum Pavir.Ia04220 I 0.000
Pavir.Ib00283 Panicum virgatum Pavir.Ib00283 I 0.000
Pavir.J03376 Panicum virgatum Pavir.J03376 I 0.000
Pavir.J34872 Panicum virgatum Pavir.J34872 I 0.000
Pavir.J39638 Panicum virgatum Pavir.J39638 I 0.000
PGSC0003DMG400009716 Solanum tuberosum PGSC0003DMG400009716 I 0.000
PK23380.1 Cannabis sativa PK23380.1 I 0.000
Pm020627 Prunus mume Pm020627 I 0.000
Pm020628 Prunus mume Pm020628 I 0.000
POPTR_0002s04200 Populus trichocarpa POPTR_0002s04200 I 0.000
PRUPE_ppa019939mg Prunus persica PRUPE_ppa019939mg I 0.000
PRUPE_ppa025889mg Prunus persica PRUPE_ppa025889mg I 0.000
SapurV1A.0006s0970 Salix purpurea SapurV1A.0006s0970 I 0.000
Sb01g041130 Sorghum bicolor Sb01g041130 I 0.000
Sb01g046990 Sorghum bicolor Sb01g046990 I 0.000
Sb04g037550 Sorghum bicolor Sb04g037550 I 0.000
Sb07g023810 Sorghum bicolor Sb07g023810 I 0.000
Si015156m.g Setaria italica Si015156m.g I 0.000
Si019578m.g Setaria italica Si019578m.g I 0.000
Si040019m.g Setaria italica Si040019m.g I 0.000
Solyc09g066270.2 Solanum lycopersicum Solyc09g066270.2 I 0.000
TCM_004103 Theobroma cacao TCM_004103 I 0.000
Thhalv10006226m.g Eutrema salsugineum Thhalv10006226m.g I 0.000
Thhalv10017158m.g Eutrema salsugineum Thhalv10017158m.g I 0.000
Thhalv10017299m.g Eutrema salsugineum Thhalv10017299m.g N 0.000
Thhalv10017903m.g Eutrema salsugineum Thhalv10017903m.g N 0.000
Traes_4AL_BB3F89030 Triticum aestivum Traes_4AL_BB3F89030 N 0.000
Traes_4AL_CAF4E16B5 Triticum aestivum Traes_4AL_CAF4E16B5 I 0.000
Traes_4BL_A4D0F4AD6 Triticum aestivum Traes_4BL_A4D0F4AD6 I 0.000
Traes_4BS_5D9291539 Triticum aestivum Traes_4BS_5D9291539 I 0.000
Traes_4DL_05F87867C Triticum aestivum Traes_4DL_05F87867C N 0.000
Traes_4DL_43D63ABE3 Triticum aestivum Traes_4DL_43D63ABE3 I 0.000
Traes_4DS_11C3B0459 Triticum aestivum Traes_4DS_11C3B0459 I 0.000
Traes_6AS_4EEA3E388 Triticum aestivum Traes_6AS_4EEA3E388 I 0.000
Traes_6BS_179B5B6E1 Triticum aestivum Traes_6BS_179B5B6E1 I 0.000
TRIUR3_07751 Triticum urartu TRIUR3_07751 I 0.000
VIT_07s0005g03020 Vitis vinifera VIT_07s0005g03020 I 0.000
LBD16 Vitis vinifera VIT_07s0005g03030 I 0.000