Bra001802 (Brassica rapa)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04873 (EIN3) IPR006957 Bra001802 T175019_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.880 0.880
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.880 0.880
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.880 0.880
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.855 0.855
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.839 0.839
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.803 0.803
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra001802.1-P EIN3 43 293

Links

Other EIN3 family TFs
Other Brassica rapa TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Al_scaffold_0002_1233 Arabidopsis lyrata Al_scaffold_0002_1233 I 0.000
WRKY62 Arabidopsis lyrata Al_scaffold_0006_13 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
WRKY62 Arabidopsis thaliana AT5G01900 D 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
BGIOSGA017860 Oryza indica BGIOSGA017860 I 0.000
BGIOSGA030113 Oryza indica BGIOSGA030113 I 0.000
BGIOSGA030346 Oryza indica BGIOSGA030346 I 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo2g095820 Brassica oleracea Bo2g095820 I 0.000
Bo5g068250 Brassica oleracea Bo5g068250 I 0.000
Bostr.20129s0455 Boechera stricta Bostr.20129s0455 I 0.000
Bostr.25463s0359 Boechera stricta Bostr.25463s0359 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0259 Boechera stricta Bostr.26959s0259 I 0.000
Bostr.26959s0261 Boechera stricta Bostr.26959s0261 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Bostr.5022s0087 Boechera stricta Bostr.5022s0087 I 0.000
Bostr.6251s0160 Boechera stricta Bostr.6251s0160 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra008454 Brassica rapa Bra008454 I 0.000
Bra008456 Brassica rapa Bra008456 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra023211 Brassica rapa Bra023211 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
Cagra.0255s0014 Capsella grandiflora Cagra.0255s0014 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.20277s0001 Capsella grandiflora Cagra.20277s0001 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10012720m.g Capsella rubella Carubv10012720m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10021860m.g Capsella rubella Carubv10021860m.g I 0.000
Carubv10021899m.g Capsella rubella Carubv10021899m.g I 0.000
Carubv10022120m.g Capsella rubella Carubv10022120m.g I 0.000
Carubv10022162m.g Capsella rubella Carubv10022162m.g I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
F775_23296 Aegilops tauschii F775_23296 N 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000
GRMZM2G158328 Zea mays GRMZM2G158328 I 0.000
LPERR05G06630 Leersia perrieri LPERR05G06630 I 0.000
LPERR05G16170 Leersia perrieri LPERR05G16170 I 0.000
LPERR10G04210 Leersia perrieri LPERR10G04210 I 0.000
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.000
MDP0000828055 Malus domestica MDP0000828055 I 0.000
MLOC_3853 Hordeum vulgare MLOC_3853 N 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_5g067680 Medicago truncatula MTR_5g067680 I 0.000
OB05G17240 Oryza brachyantha OB05G17240 I 0.000
OB05G27830 Oryza brachyantha OB05G27830 I 0.000
OBART05G20340 Oryza barthii OBART05G20340 I 0.000
OBART10G05920 Oryza barthii OBART10G05920 N 0.000
OGLUM05G21420 Oryza glumaepatula OGLUM05G21420 I 0.000
OGLUM05G21470 Oryza glumaepatula OGLUM05G21470 I 0.000
OGLUM05G21510 Oryza glumaepatula OGLUM05G21510 I 0.000
OGLUM11G00850 Oryza glumaepatula OGLUM11G00850 I 0.000
OLONG_002978 Oryza longistaminata OLONG_002978 I 0.000
OLONG_022888 Oryza longistaminata OLONG_022888 N 0.000
OMERI05G18170 Oryza meridionalis OMERI05G18170 I 0.000
OMERI05G18250 Oryza meridionalis OMERI05G18250 I 0.000
OMERI05G18260 Oryza meridionalis OMERI05G18260 I 0.000
OMERI10G04260 Oryza meridionalis OMERI10G04260 N 0.000
ONIVA05G21440 Oryza nivara ONIVA05G21440 I 0.000
ONIVA05G21460 Oryza nivara ONIVA05G21460 I 0.000
ONIVA09G03360 Oryza nivara ONIVA09G03360 I 0.000
OPUNC05G17980 Oryza punctata OPUNC05G17980 I 0.000
OPUNC05G18030 Oryza punctata OPUNC05G18030 I 0.000
OPUNC10G05310 Oryza punctata OPUNC10G05310 N 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
ORGLA05G0177200 Oryza glaberrima ORGLA05G0177200 I 0.000
ORGLA09G0026100 Oryza glaberrima ORGLA09G0026100 I 0.000
ORGLA10G0049300 Oryza glaberrima ORGLA10G0049300 N 0.000
ORUFI05G21560 Oryza rufipogon ORUFI05G21560 I 0.000
ORUFI05G21600 Oryza rufipogon ORUFI05G21600 I 0.000
OS05G0478400 Oryza sativa OS05G0478400 I 0.000
OS05G0478800 Oryza sativa OS05G0478800 I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
Pavir.Gb01556 Panicum virgatum Pavir.Gb01556 I 0.000
PDK_20s1519811g001 Phoenix dactylifera PDK_20s1519811g001 I 0.000
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.000
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.000
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.000
TCM_045555 Theobroma cacao TCM_045555 I 0.000
Thhalv10000686m.g Eutrema salsugineum Thhalv10000686m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10029232m.g Eutrema salsugineum Thhalv10029232m.g I 0.000
Traes_3DS_9A02CF31D Triticum aestivum Traes_3DS_9A02CF31D I 0.000
WRKY55 Vitis vinifera VIT_13s0067g03130 I 0.000