CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Traes_4BL_F34EBD618
(
Triticum aestivum
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF04873 (EIN3)
IPR006957
Traes_4BL_F34EBD618
T175255_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.852
0.852
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT
ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.847
0.847
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.833
0.833
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.823
0.823
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.823
0.823
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR
YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.823
0.823
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.734
0.734
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.734
0.734
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN
NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.724
0.724
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Traes_4BL_F34EBD618.1
EIN3
1
205
MSRAQDGILKYMLKMMEVCRAQGFVYGIIPEKGKPVSGASDNLRAWWKEKVRFDRNGPAAIAKYQADNAMPGSESELASGTTSPHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGISPPWWPSGDEEWWPELGIPKDQGPPPYKKPHDLKKAWKVSVLTAVIKHMSPDIEKIRRLVRQSKCLQDKMTAKEISTWLAVVKQEE
Links
Other
EIN3
family TFs
Other
Triticum aestivum
TFs
175 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29708.m000185
Ricinus communis
29708.m000185
I
0.852
30169.m006395
Ricinus communis
30169.m006395
I
0.739
AMTR_s00022p00216890
Amborella trichopoda
AMTR_s00022p00216890
I
0.759
AMTR_s00119p00117410
Amborella trichopoda
AMTR_s00119p00117410
I
0.887
Aquca_007_00017
Aquilegia coerulea
Aquca_007_00017
I
0.744
Aquca_014_00938
Aquilegia coerulea
Aquca_014_00938
I
0.867
EIN3
Arabidopsis thaliana
AT3G20770
D
0.823
BGIOSGA012535
Oryza indica
BGIOSGA012535
I
0.961
BGIOSGA023694
Oryza indica
BGIOSGA023694
I
0.862
BGIOSGA029545
Oryza indica
BGIOSGA029545
I
0.724
Bo1g108650
Brassica oleracea
Bo1g108650
I
0.818
Bo3g041690
Brassica oleracea
Bo3g041690
I
0.823
Bo3g076180
Brassica oleracea
Bo3g076180
I
0.813
Bo6g087550
Brassica oleracea
Bo6g087550
I
0.744
Bostr.29505s0037
Boechera stricta
Bostr.29505s0037
I
0.818
Bostr.3288s0016
Boechera stricta
Bostr.3288s0016
I
0.749
Bra000528
Brassica rapa
Bra000528
I
0.828
Bra008110
Brassica rapa
Bra008110
I
0.729
Bra015970
Brassica rapa
Bra015970
I
0.734
BRADI1G63780
Brachypodium distachyon
BRADI1G63780
I
0.975
BRADI3G39970
Brachypodium distachyon
BRADI3G39970
I
0.709
BRADI4G33750
Brachypodium distachyon
BRADI4G33750
I
0.714
Cagra.0876s0005
Capsella grandiflora
Cagra.0876s0005
I
0.749
Cagra.6016s0001
Capsella grandiflora
Cagra.6016s0001
I
0.833
Carubv10020043m.g
Capsella rubella
Carubv10020043m.g
I
0.749
Carubv10022879m.g
Capsella rubella
Carubv10022879m.g
I
0.833
cassava2120.valid.m1
Manihot esculenta
cassava2120.valid.m1
I
0.749
cassava3620.m1
Manihot esculenta
cassava3620.m1
I
0.852
Ca_02669
Cicer arietinum
Ca_02669
I
0.739
Ca_10236
Cicer arietinum
Ca_10236
I
0.852
chr2.CM0031.190.nc
Lotus japonicus
chr2.CM0031.190.nc
I
0.842
chr3.LjB09K03.50.nc
Lotus japonicus
chr3.LjB09K03.50.nc
I
0.739
Ciclev10000608m.g
Citrus clementina
Ciclev10000608m.g
I
0.715
Ciclev10000617m.g
Citrus clementina
Ciclev10000617m.g
I
0.711
Ciclev10014617m.g
Citrus clementina
Ciclev10014617m.g
I
0.852
Ciclev10015261m.g
Citrus clementina
Ciclev10015261m.g
I
0.749
Cucsa.143220
Cucumis sativus
Cucsa.143220
I
0.739
Cucsa.364340
Cucumis sativus
Cucsa.364340
I
0.892
Eucgr.G02632
Eucalyptus grandis
Eucgr.G02632
I
0.852
evm.TU.supercontig_103.60
Carica papaya
evm.TU.supercontig_103.60
I
0.847
evm.TU.supercontig_54.30
Carica papaya
evm.TU.supercontig_54.30
I
0.803
e_gw1.11.194.1
Physcomitrella patens
e_gw1.11.194.1
I
0.852
e_gw1.87.73.1
Physcomitrella patens
e_gw1.87.73.1
D
0.852
F775_28545
Aegilops tauschii
F775_28545
I
0.801
EIL1
Arabidopsis lyrata
fgenesh2_kg.4__646__AT2G27050.1
I
0.837
gene00379-v1.0-hybrid
Fragaria vesca
gene00379-v1.0-hybrid
I
0.707
gene25474-v1.0-hybrid
Fragaria vesca
gene25474-v1.0-hybrid
I
0.867
GLYMA02G44220
Glycine max
GLYMA02G44220
I
0.842
GLYMA13G03660
Glycine max
GLYMA13G03660
I
0.833
GLYMA13G03700
Glycine max
GLYMA13G03700
I
0.847
GLYMA14G04550
Glycine max
GLYMA14G04550
I
0.852
GLYMA20G12250
Glycine max
GLYMA20G12250
I
0.842
Gorai.003G140600
Gossypium raimondii
Gorai.003G140600
I
0.847
Gorai.004G227800
Gossypium raimondii
Gorai.004G227800
I
0.847
Gorai.009G105400
Gossypium raimondii
Gorai.009G105400
I
0.852
Gorai.010G128700
Gossypium raimondii
Gorai.010G128700
I
0.724
Gorai.013G266300
Gossypium raimondii
Gorai.013G266300
I
0.847
GRMZM2G003558
Zea mays
GRMZM2G003558
I
0.778
GRMZM2G006752
Zea mays
GRMZM2G006752
I
0.729
GRMZM2G033570
Zea mays
GRMZM2G033570
I
0.773
GRMZM2G317584
Zea mays
GRMZM2G317584
I
0.951
GSMUA_Achr10G12800_001
Musa acuminata
GSMUA_Achr10G12800_001
I
0.906
GSMUA_Achr11G25120_001
Musa acuminata
GSMUA_Achr11G25120_001
I
0.842
GSMUA_Achr2G11540_001
Musa acuminata
GSMUA_Achr2G11540_001
I
0.897
GSMUA_Achr3G09440_001
Musa acuminata
GSMUA_Achr3G09440_001
I
0.828
GSMUA_Achr3G11160_001
Musa acuminata
GSMUA_Achr3G11160_001
I
0.764
GSMUA_Achr5G27670_001
Musa acuminata
GSMUA_Achr5G27670_001
I
0.892
GSMUA_Achr6G15930_001
Musa acuminata
GSMUA_Achr6G15930_001
I
0.941
GSMUA_Achr7G21630_001
Musa acuminata
GSMUA_Achr7G21630_001
N
0.714
GSMUA_Achr8G21550_001
Musa acuminata
GSMUA_Achr8G21550_001
I
0.877
GSMUA_Achr8G25580_001
Musa acuminata
GSMUA_Achr8G25580_001
I
0.719
GSMUA_Achr9G17080_001
Musa acuminata
GSMUA_Achr9G17080_001
I
0.892
GSMUA_Achr9G27680_001
Musa acuminata
GSMUA_Achr9G27680_001
I
0.734
LPERR03G13760
Leersia perrieri
LPERR03G13760
I
0.961
LPERR07G23570
Leersia perrieri
LPERR07G23570
I
0.808
LPERR08G16890
Leersia perrieri
LPERR08G16890
I
0.704
Lus10031245.g
Linum usitatissimum
Lus10031245.g
I
0.744
Lus10031817.g
Linum usitatissimum
Lus10031817.g
I
0.744
MDP0000202831
Malus domestica
MDP0000202831
I
0.847
MDP0000212881
Malus domestica
MDP0000212881
I
0.842
MDP0000306498
Malus domestica
MDP0000306498
I
0.857
MDP0000490180
Malus domestica
MDP0000490180
I
0.734
MDP0000562585
Malus domestica
MDP0000562585
I
0.734
MDP0000564884
Malus domestica
MDP0000564884
I
0.842
MDP0000565880
Malus domestica
MDP0000565880
I
0.734
mgf012394m
Mimulus guttatus
mgf012394m
I
0.803
mgf018950m
Mimulus guttatus
mgf018950m
I
0.818
MLOC_10823
Hordeum vulgare
MLOC_10823
I
0.704
MLOC_14619
Hordeum vulgare
MLOC_14619
I
0.801
MTR_2g098470
Medicago truncatula
MTR_2g098470
I
0.739
MTR_3g078770
Medicago truncatula
MTR_3g078770
I
0.847
MTR_5g087790
Medicago truncatula
MTR_5g087790
I
0.842
OB08G26880
Oryza brachyantha
OB08G26880
I
0.704
OBART07G26760
Oryza barthii
OBART07G26760
I
0.862
OBART09G14750
Oryza barthii
OBART09G14750
I
0.729
OGLUM03G15860
Oryza glumaepatula
OGLUM03G15860
I
0.961
OGLUM09G15380
Oryza glumaepatula
OGLUM09G15380
I
0.729
OMERI03G14140
Oryza meridionalis
OMERI03G14140
I
0.961
OMERI05G02190
Oryza meridionalis
OMERI05G02190
I
0.788
OMERI07G23380
Oryza meridionalis
OMERI07G23380
I
0.701
OMERI09G11470
Oryza meridionalis
OMERI09G11470
I
0.729
ONIVA03G16680
Oryza nivara
ONIVA03G16680
I
0.961
ONIVA07G26490
Oryza nivara
ONIVA07G26490
I
0.862
ONIVA08G17420
Oryza nivara
ONIVA08G17420
I
0.729
OPUNC03G15240
Oryza punctata
OPUNC03G15240
I
0.961
OPUNC07G25150
Oryza punctata
OPUNC07G25150
I
0.862
OPUNC09G13210
Oryza punctata
OPUNC09G13210
I
0.729
orange1.1g007017m.g
Citrus sinensis
orange1.1g007017m.g
I
0.852
orange1.1g007174m.g
Citrus sinensis
orange1.1g007174m.g
I
0.711
orange1.1g007662m.g
Citrus sinensis
orange1.1g007662m.g
I
0.749
orange1.1g009144m.g
Citrus sinensis
orange1.1g009144m.g
I
0.734
ORGLA03G0150600
Oryza glaberrima
ORGLA03G0150600
I
0.961
ORGLA07G0211700
Oryza glaberrima
ORGLA07G0211700
I
0.862
ORGLA09G0113600
Oryza glaberrima
ORGLA09G0113600
I
0.729
ORUFI03G16290
Oryza rufipogon
ORUFI03G16290
I
0.961
ORUFI07G27710
Oryza rufipogon
ORUFI07G27710
I
0.862
ORUFI09G15900
Oryza rufipogon
ORUFI09G15900
I
0.724
OS03G0324200
Oryza sativa
OS03G0324200
I
0.777
OS03G0324300
Oryza sativa
OS03G0324300
I
0.777
OS07G0685700
Oryza sativa
OS07G0685700
I
0.862
OS09G0490200
Oryza sativa
OS09G0490200
D
0.724
Pavir.Bb03705
Panicum virgatum
Pavir.Bb03705
I
0.828
Pavir.Fb01951
Panicum virgatum
Pavir.Fb01951
I
0.704
Pavir.Ia03450
Panicum virgatum
Pavir.Ia03450
I
0.773
Pavir.Ib01512
Panicum virgatum
Pavir.Ib01512
I
0.951
Pavir.J01001
Panicum virgatum
Pavir.J01001
I
0.803
Pavir.J14329
Panicum virgatum
Pavir.J14329
I
0.714
PGSC0003DMG400005914
Solanum tuberosum
PGSC0003DMG400005914
I
0.833
PGSC0003DMG400005915
Solanum tuberosum
PGSC0003DMG400005915
I
0.828
PGSC0003DMG400008712
Solanum tuberosum
PGSC0003DMG400008712
I
0.847
PGSC0003DMG400027507
Solanum tuberosum
PGSC0003DMG400027507
I
0.847
PK01239.1
Cannabis sativa
PK01239.1
I
0.857
PK13351.1
Cannabis sativa
PK13351.1
I
0.857
PK19114.1
Cannabis sativa
PK19114.1
I
0.739
Pm017009
Prunus mume
Pm017009
I
0.852
Pm028171
Prunus mume
Pm028171
I
0.744
POPTR_0001s05360
Populus trichocarpa
POPTR_0001s05360
I
0.754
POPTR_0003s22090
Populus trichocarpa
POPTR_0003s22090
I
0.734
POPTR_0004s20830
Populus trichocarpa
POPTR_0004s20830
I
0.707
POPTR_0008s01200
Populus trichocarpa
POPTR_0008s01200
I
0.852
POPTR_0010s25370
Populus trichocarpa
POPTR_0010s25370
I
0.847
PRUPE_ppa003113mg
Prunus persica
PRUPE_ppa003113mg
I
0.739
PRUPE_ppa003493mg
Prunus persica
PRUPE_ppa003493mg
I
0.852
PRUPE_ppa003550mg
Prunus persica
PRUPE_ppa003550mg
I
0.842
SapurV1A.0009s0320
Salix purpurea
SapurV1A.0009s0320
I
0.734
SapurV1A.0070s0670
Salix purpurea
SapurV1A.0070s0670
I
0.847
SapurV1A.0561s0140
Salix purpurea
SapurV1A.0561s0140
I
0.847
SapurV1A.0615s0150
Salix purpurea
SapurV1A.0615s0150
I
0.852
SapurV1A.0850s0030
Salix purpurea
SapurV1A.0850s0030
I
0.739
Sb01g036740
Sorghum bicolor
Sb01g036740
I
0.956
Sb02g043350
Sorghum bicolor
Sb02g043350
I
0.793
EIL3
Arabidopsis lyrata
scaffold_202309.1
I
0.734
SELMODRAFT_16064
Selaginella moellendorffii
SELMODRAFT_16064
I
0.724
SELMODRAFT_16065
Selaginella moellendorffii
SELMODRAFT_16065
I
0.724
SELMODRAFT_449237
Selaginella moellendorffii
SELMODRAFT_449237
N
0.704
SELMODRAFT_449238
Selaginella moellendorffii
SELMODRAFT_449238
I
0.752
Si029259m.g
Setaria italica
Si029259m.g
I
0.719
Si034616m.g
Setaria italica
Si034616m.g
I
0.956
Solyc01g006650.1
Solanum lycopersicum
Solyc01g006650.1
I
0.734
Solyc01g014480.2
Solanum lycopersicum
Solyc01g014480.2
I
0.759
Solyc01g096810.2
Solanum lycopersicum
Solyc01g096810.2
I
0.703
Solyc06g073720.1
Solanum lycopersicum
Solyc06g073720.1
I
0.833
Solyc06g073730.1
Solanum lycopersicum
Solyc06g073730.1
I
0.837
TCM_040510
Theobroma cacao
TCM_040510
I
0.744
TCM_042022
Theobroma cacao
TCM_042022
I
0.703
Thhalv10001938m.g
Eutrema salsugineum
Thhalv10001938m.g
I
0.842
Traes_2BS_647C82888
Triticum aestivum
Traes_2BS_647C82888
I
0.808
Traes_4AS_2BDA1260C
Triticum aestivum
Traes_4AS_2BDA1260C
I
0.801
Traes_4DL_C083C804E
Triticum aestivum
Traes_4DL_C083C804E
I
0.990
Traes_7AS_34D476D5D1
Triticum aestivum
Traes_7AS_34D476D5D1
I
0.704
TRIUR3_26675
Triticum urartu
TRIUR3_26675
N
0.803
TRIUR3_28079
Triticum urartu
TRIUR3_28079
I
0.704
EIL3
Vitis vinifera
VIT_06s0004g01610
I
0.754
VIT_06s0009g01380
Vitis vinifera
VIT_06s0009g01380
I
0.847
VIT_13s0047g00250
Vitis vinifera
VIT_13s0047g00250
I
0.720