Gorai.003G140600 (Gossypium raimondii)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 Gorai.003G140600 T175356_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.927 0.927
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.915 0.915
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.915 0.915
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.915 0.915
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.906 0.906
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.837 0.837
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.703 0.703
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.003G140600.1 EIN3 53 300
Gorai.003G140600.2 EIN3 53 300
Gorai.003G140600.3 EIN3 53 300

Links

Other EIN3 family TFs
Other Gossypium raimondii TFs

173 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
29708.m000185 Ricinus communis 29708.m000185 I 0.951
30169.m006395 Ricinus communis 30169.m006395 I 0.715
AMTR_s00022p00216890 Amborella trichopoda AMTR_s00022p00216890 I 0.724
AMTR_s00119p00117410 Amborella trichopoda AMTR_s00119p00117410 I 0.866
Aquca_014_00938 Aquilegia coerulea Aquca_014_00938 I 0.898
EIL3 Arabidopsis thaliana AT1G73730 D 0.703
EIL1 Arabidopsis thaliana AT2G27050 D 0.903
EIN3 Arabidopsis thaliana AT3G20770 D 0.915
BGIOSGA012535 Oryza indica BGIOSGA012535 I 0.825
BGIOSGA023694 Oryza indica BGIOSGA023694 I 0.785
Bo1g108650 Brassica oleracea Bo1g108650 I 0.861
Bo3g041690 Brassica oleracea Bo3g041690 I 0.886
Bo3g076180 Brassica oleracea Bo3g076180 I 0.854
Bo5g106280 Brassica oleracea Bo5g106280 I 0.907
Bostr.19424s0573 Boechera stricta Bostr.19424s0573 I 0.919
Bostr.29505s0037 Boechera stricta Bostr.29505s0037 I 0.890
Bostr.3288s0016 Boechera stricta Bostr.3288s0016 I 0.703
Bra000528 Brassica rapa Bra000528 I 0.883
Bra001802 Brassica rapa Bra001802 I 0.847
BRADI1G63780 Brachypodium distachyon BRADI1G63780 I 0.817
Cagra.0876s0005 Capsella grandiflora Cagra.0876s0005 I 0.703
Cagra.2243s0007 Capsella grandiflora Cagra.2243s0007 I 0.919
Cagra.6016s0001 Capsella grandiflora Cagra.6016s0001 I 0.902
Carubv10013213m.g Capsella rubella Carubv10013213m.g I 0.919
Carubv10020043m.g Capsella rubella Carubv10020043m.g I 0.703
Carubv10022879m.g Capsella rubella Carubv10022879m.g I 0.902
cassava2120.valid.m1 Manihot esculenta cassava2120.valid.m1 I 0.707
cassava3620.m1 Manihot esculenta cassava3620.m1 I 0.959
Ca_02669 Cicer arietinum Ca_02669 I 0.711
Ca_07534 Cicer arietinum Ca_07534 I 0.915
Ca_10236 Cicer arietinum Ca_10236 I 0.927
chr2.CM0031.190.nc Lotus japonicus chr2.CM0031.190.nc I 0.931
chr3.LjB09K03.50.nc Lotus japonicus chr3.LjB09K03.50.nc I 0.720
Ciclev10000608m.g Citrus clementina Ciclev10000608m.g I 0.878
Ciclev10000617m.g Citrus clementina Ciclev10000617m.g I 0.902
Ciclev10014617m.g Citrus clementina Ciclev10014617m.g I 0.927
Ciclev10015261m.g Citrus clementina Ciclev10015261m.g I 0.713
Cucsa.142750 Cucumis sativus Cucsa.142750 I 0.939
Cucsa.143220 Cucumis sativus Cucsa.143220 I 0.707
Cucsa.364340 Cucumis sativus Cucsa.364340 I 0.886
Eucgr.B03664 Eucalyptus grandis Eucgr.B03664 I 0.713
Eucgr.G02632 Eucalyptus grandis Eucgr.G02632 I 0.878
Eucgr.J00631 Eucalyptus grandis Eucgr.J00631 I 0.951
evm.TU.supercontig_103.60 Carica papaya evm.TU.supercontig_103.60 I 0.939
evm.TU.supercontig_54.30 Carica papaya evm.TU.supercontig_54.30 I 0.813
e_gw1.11.194.1 Physcomitrella patens e_gw1.11.194.1 I 0.829
e_gw1.87.73.1 Physcomitrella patens e_gw1.87.73.1 D 0.837
F775_28545 Aegilops tauschii F775_28545 I 0.805
EIN3 Arabidopsis lyrata fgenesh2_kg.3__2304__AT3G20770.1 I 0.919
EIL1 Arabidopsis lyrata fgenesh2_kg.4__646__AT2G27050.1 I 0.911
gene00379-v1.0-hybrid Fragaria vesca gene00379-v1.0-hybrid I 0.866
gene20650-v1.0-hybrid Fragaria vesca gene20650-v1.0-hybrid I 0.709
gene25474-v1.0-hybrid Fragaria vesca gene25474-v1.0-hybrid I 0.919
GLYMA02G44220 Glycine max GLYMA02G44220 I 0.927
GLYMA13G03660 Glycine max GLYMA13G03660 I 0.935
GLYMA13G03700 Glycine max GLYMA13G03700 I 0.947
GLYMA13G41751 Glycine max GLYMA13G41751 I 0.725
GLYMA14G04550 Glycine max GLYMA14G04550 I 0.939
GLYMA15G03650 Glycine max GLYMA15G03650 I 0.717
GLYMA20G12250 Glycine max GLYMA20G12250 I 0.939
Gorai.004G035300 Gossypium raimondii Gorai.004G035300 I 0.787
Gorai.004G227800 Gossypium raimondii Gorai.004G227800 I 0.943
Gorai.009G071400 Gossypium raimondii Gorai.009G071400 I 0.709
Gorai.009G105400 Gossypium raimondii Gorai.009G105400 I 0.947
Gorai.013G266300 Gossypium raimondii Gorai.013G266300 I 0.939
GRMZM2G003558 Zea mays GRMZM2G003558 I 0.736
GRMZM2G033570 Zea mays GRMZM2G033570 I 0.797
GRMZM2G151811 Zea mays GRMZM2G151811 I 0.749
GRMZM2G317584 Zea mays GRMZM2G317584 I 0.805
GSMUA_Achr10G12800_001 Musa acuminata GSMUA_Achr10G12800_001 I 0.829
GSMUA_Achr11G25120_001 Musa acuminata GSMUA_Achr11G25120_001 I 0.764
GSMUA_Achr2G11540_001 Musa acuminata GSMUA_Achr2G11540_001 I 0.813
GSMUA_Achr3G09440_001 Musa acuminata GSMUA_Achr3G09440_001 I 0.752
GSMUA_Achr5G27670_001 Musa acuminata GSMUA_Achr5G27670_001 I 0.833
GSMUA_Achr6G15930_001 Musa acuminata GSMUA_Achr6G15930_001 I 0.837
GSMUA_Achr8G21550_001 Musa acuminata GSMUA_Achr8G21550_001 I 0.821
GSMUA_Achr9G17080_001 Musa acuminata GSMUA_Achr9G17080_001 I 0.797
LPERR03G13760 Leersia perrieri LPERR03G13760 I 0.829
LPERR07G23570 Leersia perrieri LPERR07G23570 I 0.740
Lus10031817.g Linum usitatissimum Lus10031817.g I 0.703
MDP0000202831 Malus domestica MDP0000202831 I 0.890
MDP0000212881 Malus domestica MDP0000212881 I 0.882
MDP0000306498 Malus domestica MDP0000306498 I 0.882
MDP0000490180 Malus domestica MDP0000490180 I 0.711
MDP0000562585 Malus domestica MDP0000562585 I 0.711
MDP0000564884 Malus domestica MDP0000564884 I 0.882
MDP0000565880 Malus domestica MDP0000565880 I 0.711
mgf012394m Mimulus guttatus mgf012394m I 0.817
mgf015996m Mimulus guttatus mgf015996m I 0.869
mgf018950m Mimulus guttatus mgf018950m I 0.890
mgf020935m Mimulus guttatus mgf020935m I 0.700
MLOC_14619 Hordeum vulgare MLOC_14619 I 0.805
MTR_2g098470 Medicago truncatula MTR_2g098470 I 0.728
MTR_3g078770 Medicago truncatula MTR_3g078770 I 0.906
MTR_5g087790 Medicago truncatula MTR_5g087790 I 0.923
OBART07G26760 Oryza barthii OBART07G26760 I 0.720
OGLUM03G15860 Oryza glumaepatula OGLUM03G15860 I 0.825
OMERI03G14140 Oryza meridionalis OMERI03G14140 I 0.825
OMERI05G02190 Oryza meridionalis OMERI05G02190 I 0.727
OMERI07G23380 Oryza meridionalis OMERI07G23380 I 0.765
ONIVA03G16680 Oryza nivara ONIVA03G16680 I 0.825
ONIVA07G26490 Oryza nivara ONIVA07G26490 I 0.785
OPUNC03G15240 Oryza punctata OPUNC03G15240 I 0.825
OPUNC07G25150 Oryza punctata OPUNC07G25150 I 0.785
orange1.1g007017m.g Citrus sinensis orange1.1g007017m.g I 0.927
orange1.1g007174m.g Citrus sinensis orange1.1g007174m.g I 0.902
orange1.1g007662m.g Citrus sinensis orange1.1g007662m.g I 0.713
orange1.1g009144m.g Citrus sinensis orange1.1g009144m.g I 0.878
ORGLA03G0150600 Oryza glaberrima ORGLA03G0150600 I 0.825
ORGLA07G0211700 Oryza glaberrima ORGLA07G0211700 I 0.785
ORUFI03G16290 Oryza rufipogon ORUFI03G16290 I 0.825
ORUFI07G27710 Oryza rufipogon ORUFI07G27710 I 0.785
OS03G0324200 Oryza sativa OS03G0324200 I 0.809
OS03G0324300 Oryza sativa OS03G0324300 I 0.809
OS07G0685700 Oryza sativa OS07G0685700 I 0.785
Pavir.Bb03705 Panicum virgatum Pavir.Bb03705 I 0.736
Pavir.Ia03450 Panicum virgatum Pavir.Ia03450 I 0.797
Pavir.Ib01512 Panicum virgatum Pavir.Ib01512 I 0.805
Pavir.J01001 Panicum virgatum Pavir.J01001 I 0.736
PDK_20s1443543g001 Phoenix dactylifera PDK_20s1443543g001 I 0.798
PGSC0003DMG400005914 Solanum tuberosum PGSC0003DMG400005914 I 0.886
PGSC0003DMG400005915 Solanum tuberosum PGSC0003DMG400005915 I 0.898
PGSC0003DMG400008712 Solanum tuberosum PGSC0003DMG400008712 I 0.919
PGSC0003DMG400027507 Solanum tuberosum PGSC0003DMG400027507 I 0.862
PGSC0003DMG400029908 Solanum tuberosum PGSC0003DMG400029908 I 0.717
PK01239.1 Cannabis sativa PK01239.1 I 0.898
PK13351.1 Cannabis sativa PK13351.1 I 0.894
PK19114.1 Cannabis sativa PK19114.1 I 0.715
Pm017009 Prunus mume Pm017009 I 0.898
Pm028171 Prunus mume Pm028171 I 0.720
POPTR_0001s05360 Populus trichocarpa POPTR_0001s05360 I 0.720
POPTR_0003s22090 Populus trichocarpa POPTR_0003s22090 I 0.703
POPTR_0004s20830 Populus trichocarpa POPTR_0004s20830 I 0.939
POPTR_0008s01200 Populus trichocarpa POPTR_0008s01200 I 0.878
POPTR_0009s16080 Populus trichocarpa POPTR_0009s16080 I 0.935
POPTR_0010s25370 Populus trichocarpa POPTR_0010s25370 I 0.878
PRUPE_ppa003113mg Prunus persica PRUPE_ppa003113mg I 0.715
PRUPE_ppa003493mg Prunus persica PRUPE_ppa003493mg I 0.821
PRUPE_ppa003550mg Prunus persica PRUPE_ppa003550mg I 0.878
Q9ZWK1_TOBAC Nicotiana tabacum Q9ZWK1_TOBAC D 0.923
SapurV1A.0009s0320 Salix purpurea SapurV1A.0009s0320 I 0.703
SapurV1A.0036s0870 Salix purpurea SapurV1A.0036s0870 I 0.874
SapurV1A.0070s0670 Salix purpurea SapurV1A.0070s0670 I 0.878
SapurV1A.0561s0140 Salix purpurea SapurV1A.0561s0140 I 0.927
SapurV1A.0615s0150 Salix purpurea SapurV1A.0615s0150 I 0.943
SapurV1A.0850s0030 Salix purpurea SapurV1A.0850s0030 I 0.707
Sb01g036740 Sorghum bicolor Sb01g036740 I 0.817
Sb02g043350 Sorghum bicolor Sb02g043350 I 0.720
SELMODRAFT_112063 Selaginella moellendorffii SELMODRAFT_112063 I 0.801
SELMODRAFT_136229 Selaginella moellendorffii SELMODRAFT_136229 I 0.801
SELMODRAFT_16064 Selaginella moellendorffii SELMODRAFT_16064 I 0.720
SELMODRAFT_16065 Selaginella moellendorffii SELMODRAFT_16065 I 0.720
SELMODRAFT_449238 Selaginella moellendorffii SELMODRAFT_449238 I 0.809
Si029213m.g Setaria italica Si029213m.g I 0.741
Si034616m.g Setaria italica Si034616m.g I 0.809
Solyc01g009170.2 Solanum lycopersicum Solyc01g009170.2 I 0.919
Solyc01g014480.2 Solanum lycopersicum Solyc01g014480.2 I 0.715
Solyc01g096810.2 Solanum lycopersicum Solyc01g096810.2 I 0.862
Solyc06g073720.1 Solanum lycopersicum Solyc06g073720.1 I 0.902
Solyc06g073730.1 Solanum lycopersicum Solyc06g073730.1 I 0.894
TCM_040510 Theobroma cacao TCM_040510 I 0.707
TCM_042022 Theobroma cacao TCM_042022 I 0.951
Thhalv10001938m.g Eutrema salsugineum Thhalv10001938m.g I 0.915
Thhalv10020292m.g Eutrema salsugineum Thhalv10020292m.g I 0.923
Traes_2BS_647C82888 Triticum aestivum Traes_2BS_647C82888 I 0.732
Traes_4AS_2BDA1260C Triticum aestivum Traes_4AS_2BDA1260C I 0.805
Traes_4BL_F34EBD618 Triticum aestivum Traes_4BL_F34EBD618 I 0.847
Traes_4DL_C083C804E Triticum aestivum Traes_4DL_C083C804E I 0.817
TRIUR3_30860 Triticum urartu TRIUR3_30860 I 0.711
EIL3 Vitis vinifera VIT_06s0004g01610 I 0.707
VIT_06s0009g01380 Vitis vinifera VIT_06s0009g01380 I 0.878
VIT_13s0047g00250 Vitis vinifera VIT_13s0047g00250 I 0.906