orange1.1g009144m.g (Citrus sinensis)
EIN3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF04873 (EIN3) IPR006957 orange1.1g009144m.g T175388_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9ZWK1_TOBAC
M10470_2.00 		Nicotiana tabacum
AGRTWCAT
ATGWAYCT		 Transfac
Matys et al.(2006)
P$TEIL_01 		0.774 0.774
EIN3
M00725_2.00 		Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN		 PBM
Chang et al.(2013)
pTH8729 		0.874 0.874
EIN3
M06878_2.00 		Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC		 Dap-seq
OMalley et al.(2016)
EIN3_col_a 		0.874 0.874
EIN3
M06879_2.00 		Arabidopsis thaliana
RCCGTTR
YAACGGY		 Dap-seq
OMalley et al.(2016)
EIN3_colamp_a 		0.797 0.797
EIL1
M00724_2.00 		Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN		 PBM
Chang et al.(2013)
pTH7932 		0.785 0.785
e_gw1.87.73.1
M00726_2.00 		Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN		 PBM
Chang et al.(2013)
pTH8479 		0.833 0.833
EIL3
M00723_2.00 		Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN		 PBM
Chang et al.(2013)
pTH7933 		0.703 0.703
EIL3
M06877_2.00 		Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN		 Dap-seq
OMalley et al.(2016)
EIL3_col_b 		0.703 0.703
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g009140m EIN3 47 294
orange1.1g009144m EIN3 47 294
orange1.1g016498m EIN3 61 140
orange1.1g016500m EIN3 61 140
orange1.1g016840m EIN3 47 181

Links

Other EIN3 family TFs
Other Citrus sinensis TFs

174 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AAEL008190 Aedes aegypti AAEL008190 N 0.000
AALB000200 Anopheles albimanus AALB000200 I 0.000
AARA003793 Anopheles arabiensis AARA003793 I 0.000
AATE012724 Anopheles atroparvus AATE012724 I 0.000
ACEP23825 Atta cephalotes ACEP23825 I 0.000
ACHR008323 Anopheles christyi ACHR008323 I 0.000
ACOM029390 Anopheles coluzzii ACOM029390 I 0.000
ACUA027275 Anopheles culicifacies ACUA027275 I 0.000
ADIR009414 Anopheles dirus ADIR009414 I 0.000
AEPI007123 Anopheles epiroticus AEPI007123 I 0.000
AFAF019729 Anopheles farauti AFAF019729 I 0.000
AFUN010726 Anopheles funestus AFUN010726 I 0.000
AGAP009983 Anopheles gambiae AGAP009983 I 0.000
AMAM007264 Anopheles maculatus AMAM007264 I 0.000
AMEC011376 Anopheles melas AMEC011376 I 0.000
AMIN006744 Anopheles minimus AMIN006744 I 0.000
AQUA009094 Anopheles quadriannulatus AQUA009094 I 0.000
ASIS002214 Anopheles sinensis ASIS002214 I 0.000
ASTEI03995 Anopheles stephensi ASTEI03995 I 0.000
BGIBMGA009116 Bombyx mori BGIBMGA009116 I 0.000
Cflo_08671--XP_001121050.1_APIME Camponotus floridanus Cflo_08671--XP_001121050.1_APIME I 0.000
CLEC001934 Cimex lectularius CLEC001934 I 0.000
CPIJ003113 Culex quinquefasciatus CPIJ003113 I 0.000
CpipJ_CPIJ003113 Culex pipiens CpipJ_CPIJ003113 I 0.000
net Drosophila melanogaster FBgn0002931 D 0.000
GA11011 Drosophila pseudoobscura FBgn0071067 I 0.000
GF14859 Drosophila ananassae FBgn0091886 I 0.000
GG24687 Drosophila erecta FBgn0116818 I 0.000
GH10058 Drosophila grimshawi FBgn0117539 I 0.000
GI16429 Drosophila mojavensis FBgn0139177 I 0.000
GL13900 Drosophila persimilis FBgn0151505 I 0.000
GM16704 Drosophila sechellia FBgn0171617 I 0.000
GD22993 Drosophila simulans FBgn0194385 I 0.000
GJ16214 Drosophila virilis FBgn0203399 I 0.000
GK21091 Drosophila willistoni FBgn0223083 I 0.000
GE16494 Drosophila yakuba FBgn0234011 I 0.000
GB46156 Apis mellifera GB46156 N 0.000
HHAL005211-PA Halyomorpha halys HHAL005211-PA I 0.000
HMEL016722 Heliconius melpomene HMEL016722 N 0.000
Hsal_05296--XP_001121050.1_APIME Harpegnathos saltator Hsal_05296--XP_001121050.1_APIME N 0.000
KGM_16315 Danaus plexippus KGM_16315 N 0.000
L798_06974 Zootermopsis nevadensis L798_06974 I 0.000
LCUP006840 Lucilia cuprina LCUP006840 I 0.000
LDEC018964 Leptinotarsa decemlineata LDEC018964 N 0.000
MCINX005941 Melitaea cinxia MCINX005941 N 0.000
MDOA010091 Musca domestica MDOA010091 I 0.000
PHUM129210 Pediculus humanus PHUM129210 I 0.000
PPAI008042 Phlebotomus papatasi PPAI008042 N 0.000
SINV15468 Solenopsis invicta SINV15468 I 0.000
TC005579 Tribolium castaneum TC005579 N 0.000
YQE_06569 Dendroctonus ponderosae YQE_06569 N 0.000