CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
PK19114.1
(
Cannabis sativa
)
EIN3
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF04873 (EIN3)
IPR006957
PK19114.1
T175417_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
EIL3
M00723_2.00
Arabidopsis thaliana
NAGRTWCATNN
NNATGWAYCTN
PBM
Chang et al.(2013)
pTH7933
0.822
0.822
EIL3
M06877_2.00
Arabidopsis thaliana
NYGTCYAGRTWCAWDNWHNHH
DDNDWNHWTGWAYCTRGACRN
Dap-seq
OMalley et al.(2016)
EIL3_col_b
0.822
0.822
OS09G0490200
M01970_2.00
Oryza sativa
NMGRTACATNN
NNATGTAYCKN
PBM
Weirauch et al.(2014)
pTH9013
0.798
0.798
e_gw1.87.73.1
M00726_2.00
Physcomitrella patens
NNNRTDCDBN
NVHGHAYNNN
PBM
Chang et al.(2013)
pTH8479
0.721
0.721
Q9ZWK1_TOBAC
M10470_2.00
Nicotiana tabacum
AGRTWCAT
ATGWAYCT
Transfac
Matys et al.(2006)
P$TEIL_01
0.721
0.721
EIN3
M00725_2.00
Arabidopsis thaliana
NNRTDHAYNN
NNRTDHAYNN
PBM
Chang et al.(2013)
pTH8729
0.713
0.713
EIN3
M06878_2.00
Arabidopsis thaliana
GDMYANRTWCAWTGH
DCAWTGWAYNTRKHC
Dap-seq
OMalley et al.(2016)
EIN3_col_a
0.713
0.713
EIN3
M06879_2.00
Arabidopsis thaliana
RCCGTTR
YAACGGY
Dap-seq
OMalley et al.(2016)
EIN3_colamp_a
0.713
0.713
EIL1
M00724_2.00
Arabidopsis thaliana
NNVRTDMRN
NYKHAYBNN
PBM
Chang et al.(2013)
pTH7932
0.704
0.704
For this family, TFs with SR scores >
0.700
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
PK19114.1
EIN3
50
297
EELERRMWKDRIKLKRLKERQKLAAQQAAEKQKPKQTSDQARRKKMSRAQDGILKYMLKLMEVCKARGFVYGIIPEKGKPVSGASDNIRAWWKEKVKFDKNGPAAIAKYEAECLAMCEADNNRNGNSQSILQDLQDATLGSLLSSLMQHCEPPQRKFPLEKKVPPPWWPTGKEDWWVKLGLPHVQTPPYKKPHDLKKMWKVGVLTAVIKHMSPDIAKIRRHVRQSKCLQDKMTAKESAIWLGVLSREE
Links
Other
EIN3
family TFs
Other
Cannabis sativa
TFs
205 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
A1O1_07037
Capronia coronata
A1O1_07037
N
A1O5_10265
Cladophialophora psammophila
A1O5_10265
N
A1O9_07829
Exophiala aquamarina
A1O9_07829
N
HMPREF1541_00993
Cyphellophora europaea
HMPREF1541_00993
N
PV05_07389
Exophiala xenobiotica
PV05_07389
N
PV06_07760
Exophiala oligosperma
PV06_07760
N
PV07_02524
Cladophialophora immunda
PV07_02524
N
PV10_03380
Exophiala mesophila
PV10_03380
N
PV11_03885
Exophiala sideris
PV11_03885
N
Z517_00123
Fonsecaea pedrosoi
Z517_00123
N
Z518_02678
Rhinocladiella mackenziei
Z518_02678
N
Z519_10931
Cladophialophora bantiana
Z519_10931
N