CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Eucgr.K02085
(
Eucalyptus grandis
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Eucgr.K02085
T181365_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Eucgr.K02085.1
FAR1
46
135
VFYDTYATHMGFIMRVDAFRRSMRDGKVVWRRLVCNKEGFRKSRPRRSENRKPRAITREGCKAMIVVKKDKTGKWVVTKFIKEHNHPLIA
Links
Other
FAR1
family TFs
Other
Eucalyptus grandis
TFs
24 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
29983.m003255
Ricinus communis
29983.m003255
N
AMTR_s00003p00264810
Amborella trichopoda
AMTR_s00003p00264810
N
Bo1g051270
Brassica oleracea
Bo1g051270
N
Bo7g111950
Brassica oleracea
Bo7g111950
N
Bostr.7867s0654
Boechera stricta
Bostr.7867s0654
N
Bra026276
Brassica rapa
Bra026276
N
Cagra.1225s0078
Capsella grandiflora
Cagra.1225s0078
N
Carubv10005638m.g
Capsella rubella
Carubv10005638m.g
N
cassava12533.valid.m1
Manihot esculenta
cassava12533.valid.m1
N
cassava18740.valid.m1
Manihot esculenta
cassava18740.valid.m1
N
Ca_19014
Cicer arietinum
Ca_19014
N
Cla007849
Citrullus lanatus
Cla007849
N
Cucsa.147930
Cucumis sativus
Cucsa.147930
N
Eucgr.K00939
Eucalyptus grandis
Eucgr.K00939
N
evm.TU.supercontig_34.111
Carica papaya
evm.TU.supercontig_34.111
N
ULT1
Arabidopsis lyrata
fgenesh2_kg.7__1389__AT4G28190.1
N
gene10278-v1.0-hybrid
Fragaria vesca
gene10278-v1.0-hybrid
N
GLYMA06G45180
Glycine max
GLYMA06G45180
N
GLYMA12G11800
Glycine max
GLYMA12G11800
N
Gorai.005G204800
Gossypium raimondii
Gorai.005G204800
N
Gorai.008G152400
Gossypium raimondii
Gorai.008G152400
N
GSMUA_Achr2G02900_001
Musa acuminata
GSMUA_Achr2G02900_001
N
Lus10018560.g
Linum usitatissimum
Lus10018560.g
N
Lus10039791.g
Linum usitatissimum
Lus10039791.g
N
MDP0000089136
Malus domestica
MDP0000089136
N
MDP0000237588
Malus domestica
MDP0000237588
N
MDP0000315130
Malus domestica
MDP0000315130
N
MTR_0072s0040
Medicago truncatula
MTR_0072s0040
N
PK16281.1
Cannabis sativa
PK16281.1
N
Pm015354
Prunus mume
Pm015354
N
POPTR_0013s14170
Populus trichocarpa
POPTR_0013s14170
N
PRUPE_ppa017439mg
Prunus persica
PRUPE_ppa017439mg
N
SapurV1A.0048s0510
Salix purpurea
SapurV1A.0048s0510
N
SapurV1A.0492s0170
Salix purpurea
SapurV1A.0492s0170
N
SapurV1A.2807s0020
Salix purpurea
SapurV1A.2807s0020
N
TCM_007971
Theobroma cacao
TCM_007971
N
VIT_12s0059g01980
Vitis vinifera
VIT_12s0059g01980
N