CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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gene19817-v1.0-hybrid
(
Fragaria vesca
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
gene19817-v1.0-hybrid
T181434_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
mrna19817.1-v1.0-hybrid
FAR1
65
157
EYYGNFARRNGFSVRKERSRLSPQLGIYKRDFVCYRSGFAPAKKKLTGDHHRDRKSVRCGCDAKMYLSKEVVDGVSQWIVVQFSNVHNHELLE
Links
Other
FAR1
family TFs
Other
Fragaria vesca
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30169.m006547
Ricinus communis
30169.m006547
N
AT1G79740
Arabidopsis thaliana
AT1G79740
N
Carubv10019846m.g
Capsella rubella
Carubv10019846m.g
N
Cla004997
Citrullus lanatus
Cla004997
N
Cucsa.201910
Cucumis sativus
Cucsa.201910
N
evm.TU.supercontig_3.39
Carica papaya
evm.TU.supercontig_3.39
N
gene13122-v1.0-hybrid
Fragaria vesca
gene13122-v1.0-hybrid
N
GLYMA06G12991
Glycine max
GLYMA06G12991
N
GSMUA_Achr8G19830_001
Musa acuminata
GSMUA_Achr8G19830_001
N
MDP0000411586
Malus domestica
MDP0000411586
N
OB01G17890
Oryza brachyantha
OB01G17890
N
Pavir.Ea00125
Panicum virgatum
Pavir.Ea00125
N
Pavir.Eb00173
Panicum virgatum
Pavir.Eb00173
N
PGSC0003DMG400009096
Solanum tuberosum
PGSC0003DMG400009096
N
PK04121.1
Cannabis sativa
PK04121.1
N
PRUPE_ppa002763mg
Prunus persica
PRUPE_ppa002763mg
N
Sb03g001335
Sorghum bicolor
Sb03g001335
N
Solyc03g007510.2
Solanum lycopersicum
Solyc03g007510.2
N
TCM_015328
Theobroma cacao
TCM_015328
N
VIT_16s0050g02440
Vitis vinifera
VIT_16s0050g02440
N