CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Gorai.003G140100
(
Gossypium raimondii
)
FAR1
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF03101 (FAR1)
IPR004330
Gorai.003G140100
T181488_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Gorai.003G140100.1
FAR1
61
136
TYYDEYCRHMGFNSKVGQLSRSKTDGTVVAREFVCGKDGLKRRSADSCDAMLRIELKGDKWVVTKFVKEHRHSVTS
Gorai.003G140100.2
FAR1
61
136
TYYDEYCRHMGFNSKVGQLSRSKTDGTVVAREFVCGKDGLKRRSADSCDAMLRIELKGDKWVVTKFVKEHRHSVTS
Links
Other
FAR1
family TFs
Other
Gossypium raimondii
TFs
9 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
cassava42755.valid.m1
Manihot esculenta
cassava42755.valid.m1
N
0.763
Cucsa.142680
Cucumis sativus
Cucsa.142680
N
0.763
MDP0000138209
Malus domestica
MDP0000138209
N
0.740
MDP0000150696
Malus domestica
MDP0000150696
N
0.750
MDP0000537221
Malus domestica
MDP0000537221
N
0.740
Pm022953
Prunus mume
Pm022953
N
0.753
PRUPE_ppa001395mg
Prunus persica
PRUPE_ppa001395mg
N
0.776
TCM_042009
Theobroma cacao
TCM_042009
N
0.816