Gorai.N002500 (Gossypium raimondii)
FAR1

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF03101 (FAR1) IPR004330 Gorai.N002500 T181519_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.N002500.1 FAR1 78 169
Gorai.N002500.2 FAR1 78 169
Gorai.N002500.3 FAR1 78 169

Links

Other FAR1 family TFs
Other Gossypium raimondii TFs

25 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
27810.m000651 Ricinus communis 27810.m000651 N
30055.m001542 Ricinus communis 30055.m001542 N
30061.m000294 Ricinus communis 30061.m000294 N
30169.m006417 Ricinus communis 30169.m006417 N
AMTR_s00022p00243980 Amborella trichopoda AMTR_s00022p00243980 N
Aquca_004_00109 Aquilegia coerulea Aquca_004_00109 N
Aquca_006_00227 Aquilegia coerulea Aquca_006_00227 N
Aquca_040_00077 Aquilegia coerulea Aquca_040_00077 N
WIP3 Arabidopsis thaliana AT1G08290 N
WIP2 Arabidopsis thaliana AT3G57670 N
BGIOSGA030081 Oryza indica BGIOSGA030081 N
BGIOSGA031001 Oryza indica BGIOSGA031001 N
Bo4g111000 Brassica oleracea Bo4g111000 N
Bo5g008880 Brassica oleracea Bo5g008880 N
Bo5g081360 Brassica oleracea Bo5g081360 N
Bo6g073120 Brassica oleracea Bo6g073120 N
Bo8g092070 Brassica oleracea Bo8g092070 N
Bo8g112550 Brassica oleracea Bo8g112550 N
Bostr.1040s0072 Boechera stricta Bostr.1040s0072 N
Bostr.20903s0019 Boechera stricta Bostr.20903s0019 N
Bostr.25219s0116 Boechera stricta Bostr.25219s0116 N
Bra003295 Brassica rapa Bra003295 N
Bra007346 Brassica rapa Bra007346 N
Bra014612 Brassica rapa Bra014612 N
Bra018638 Brassica rapa Bra018638 N
Bra031621 Brassica rapa Bra031621 N
BRADI3G39820 Brachypodium distachyon BRADI3G39820 N
BRADI4G33557 Brachypodium distachyon BRADI4G33557 N
Cagra.0210s0004 Capsella grandiflora Cagra.0210s0004 N
Cagra.0764s0003 Capsella grandiflora Cagra.0764s0003 N
Cagra.4395s0018 Capsella grandiflora Cagra.4395s0018 N
Carubv10009617m.g Capsella rubella Carubv10009617m.g N
Carubv10012266m.g Capsella rubella Carubv10012266m.g N
Carubv10017428m.g Capsella rubella Carubv10017428m.g N
cassava13451.valid.m1 Manihot esculenta cassava13451.valid.m1 N
cassava16214.m1 Manihot esculenta cassava16214.m1 N
cassava34009.m1 Manihot esculenta cassava34009.m1 N
cassava35956.valid.m1 Manihot esculenta cassava35956.valid.m1 N
cassava39829.m1 Manihot esculenta cassava39829.m1 N
cassava41737.m1 Manihot esculenta cassava41737.m1 N
cassava44390.m1 Manihot esculenta cassava44390.m1 N
cassava5227.m1 Manihot esculenta cassava5227.m1 N
Ca_07051 Cicer arietinum Ca_07051 N
Ca_07269 Cicer arietinum Ca_07269 N
Ca_16482 Cicer arietinum Ca_16482 N
Ca_21713 Cicer arietinum Ca_21713 N
Ca_27078 Cicer arietinum Ca_27078 N
chr1.CM0318.720.nd Lotus japonicus chr1.CM0318.720.nd N
chr3.CM1144.10.nc Lotus japonicus chr3.CM1144.10.nc N
Ciclev10003648m.g Citrus clementina Ciclev10003648m.g N
Ciclev10005189m.g Citrus clementina Ciclev10005189m.g N
Ciclev10017716m.g Citrus clementina Ciclev10017716m.g N
Ciclev10028757m.g Citrus clementina Ciclev10028757m.g N
Cla000184 Citrullus lanatus Cla000184 N
Cla008187 Citrullus lanatus Cla008187 N
Cla015481 Citrullus lanatus Cla015481 N
Cucsa.050260 Cucumis sativus Cucsa.050260 N
Cucsa.065460 Cucumis sativus Cucsa.065460 N
Cucsa.199850 Cucumis sativus Cucsa.199850 N
Cucsa.242970 Cucumis sativus Cucsa.242970 N
Cucsa.357260 Cucumis sativus Cucsa.357260 N
Eucgr.A02400 Eucalyptus grandis Eucgr.A02400 N
Eucgr.B03870 Eucalyptus grandis Eucgr.B03870 N
Eucgr.F00336 Eucalyptus grandis Eucgr.F00336 N
Eucgr.J00788 Eucalyptus grandis Eucgr.J00788 N
evm.TU.contig_31438 Carica papaya evm.TU.contig_31438 N
evm.TU.contig_35924 Carica papaya evm.TU.contig_35924 N
evm.TU.supercontig_84.74 Carica papaya evm.TU.supercontig_84.74 N
e_gw1.203.23.1 Physcomitrella patens e_gw1.203.23.1 N
F775_14972 Aegilops tauschii F775_14972 N
WIP3 Arabidopsis lyrata fgenesh1_pg.C_scaffold_1000684 N
TT1 Arabidopsis lyrata fgenesh2_kg.1__3606__AT1G34790.1 N
NTT Arabidopsis lyrata fgenesh2_kg.5__2209__AT3G57670.1 N
gene14361-v1.0-hybrid Fragaria vesca gene14361-v1.0-hybrid N
gene20598-v1.0-hybrid Fragaria vesca gene20598-v1.0-hybrid N
gene22042-v1.0-hybrid Fragaria vesca gene22042-v1.0-hybrid N
GLYMA02G31270 Glycine max GLYMA02G31270 N
GLYMA08G16390 Glycine max GLYMA08G16390 N
GLYMA11G19060 Glycine max GLYMA11G19060 N
GLYMA12G09400 Glycine max GLYMA12G09400 N
GLYMA12G30930 Glycine max GLYMA12G30930 N
GLYMA12G36660 Glycine max GLYMA12G36660 N
GLYMA13G01720 Glycine max GLYMA13G01720 N
GLYMA13G27371 Glycine max GLYMA13G27371 N
GLYMA13G39370 Glycine max GLYMA13G39370 N
GLYMA14G35140 Glycine max GLYMA14G35140 N
GLYMA15G42870 Glycine max GLYMA15G42870 N
GLYMA19G32430 Glycine max GLYMA19G32430 N
Gorai.001G121700 Gossypium raimondii Gorai.001G121700 N
Gorai.002G152600 Gossypium raimondii Gorai.002G152600 N
Gorai.003G089200 Gossypium raimondii Gorai.003G089200 N
Gorai.004G037000 Gossypium raimondii Gorai.004G037000 N
Gorai.004G065400 Gossypium raimondii Gorai.004G065400 N
Gorai.006G111400 Gossypium raimondii Gorai.006G111400 N
Gorai.006G138700 Gossypium raimondii Gorai.006G138700 N
Gorai.007G177300 Gossypium raimondii Gorai.007G177300 N
Gorai.010G039600 Gossypium raimondii Gorai.010G039600 N
Gorai.013G250800 Gossypium raimondii Gorai.013G250800 N
GRMZM2G061545 Zea mays GRMZM2G061545 N
GRMZM2G071101 Zea mays GRMZM2G071101 N
GRMZM2G084014 Zea mays GRMZM2G084014 N
GRMZM2G445684 Zea mays GRMZM2G445684 N
GSMUA_Achr3G03850_001 Musa acuminata GSMUA_Achr3G03850_001 N
GSMUA_Achr3G11050_001 Musa acuminata GSMUA_Achr3G11050_001 N
GSMUA_Achr3G11870_001 Musa acuminata GSMUA_Achr3G11870_001 N
GSMUA_Achr4G01560_001 Musa acuminata GSMUA_Achr4G01560_001 N
GSMUA_Achr8G25650_001 Musa acuminata GSMUA_Achr8G25650_001 N
GSMUA_Achr9G12600_001 Musa acuminata GSMUA_Achr9G12600_001 N
GSMUA_AchrUn_randomG20320_001 Musa acuminata GSMUA_AchrUn_randomG20320_001 N
GSMUA_AchrUn_randomG22660_001 Musa acuminata GSMUA_AchrUn_randomG22660_001 N
gw1.359.34.1 Physcomitrella patens gw1.359.34.1 N
LjSGA_032817.1 Lotus japonicus LjSGA_032817.1 N
LPERR08G16620 Leersia perrieri LPERR08G16620 N
LPERR09G10700 Leersia perrieri LPERR09G10700 N
Lus10004887.g Linum usitatissimum Lus10004887.g N
Lus10020597.g Linum usitatissimum Lus10020597.g N
Lus10029525.g Linum usitatissimum Lus10029525.g N
Lus10031271.g Linum usitatissimum Lus10031271.g N
Lus10031838.g Linum usitatissimum Lus10031838.g N
Lus10033454.g Linum usitatissimum Lus10033454.g N
Lus10039613.g Linum usitatissimum Lus10039613.g N
MDP0000131949 Malus domestica MDP0000131949 N
MDP0000142494 Malus domestica MDP0000142494 N
MDP0000144266 Malus domestica MDP0000144266 N
MDP0000300013 Malus domestica MDP0000300013 N
MDP0000403797 Malus domestica MDP0000403797 N
MDP0000573922 Malus domestica MDP0000573922 N
MDP0000580545 Malus domestica MDP0000580545 N
MDP0000601705 Malus domestica MDP0000601705 N
mgf022319m Mimulus guttatus mgf022319m N
mgf022981m Mimulus guttatus mgf022981m N
MLOC_2787 Hordeum vulgare MLOC_2787 N
MLOC_65351 Hordeum vulgare MLOC_65351 N
OB08G26650 Oryza brachyantha OB08G26650 N
OBART06G20890 Oryza barthii OBART06G20890 N
OBART08G19670 Oryza barthii OBART08G19670 N
OBART09G03640 Oryza barthii OBART09G03640 N
OGLUM08G20830 Oryza glumaepatula OGLUM08G20830 N
OGLUM09G04400 Oryza glumaepatula OGLUM09G04400 N
OGLUM09G15150 Oryza glumaepatula OGLUM09G15150 N
OMERI08G16450 Oryza meridionalis OMERI08G16450 N
OMERI09G02890 Oryza meridionalis OMERI09G02890 N
OMERI09G11270 Oryza meridionalis OMERI09G11270 N
ONIVA02G14580 Oryza nivara ONIVA02G14580 N
ONIVA08G21960 Oryza nivara ONIVA08G21960 N
ONIVA09G15100 Oryza nivara ONIVA09G15100 N
OPUNC08G17810 Oryza punctata OPUNC08G17810 N
OPUNC09G03280 Oryza punctata OPUNC09G03280 N
OPUNC09G12930 Oryza punctata OPUNC09G12930 N
orange1.1g019587m.g Citrus sinensis orange1.1g019587m.g N
orange1.1g037179m.g Citrus sinensis orange1.1g037179m.g N
orange1.1g037234m.g Citrus sinensis orange1.1g037234m.g N
orange1.1g039549m.g Citrus sinensis orange1.1g039549m.g N
orange1.1g040794m.g Citrus sinensis orange1.1g040794m.g N
ORGLA08G0173000 Oryza glaberrima ORGLA08G0173000 N
ORGLA09G0111700 Oryza glaberrima ORGLA09G0111700 N
ORGLA09G0176200 Oryza glaberrima ORGLA09G0176200 N
ORUFI09G04060 Oryza rufipogon ORUFI09G04060 N
ORUFI09G15680 Oryza rufipogon ORUFI09G15680 N
OS08G0504000 Oryza sativa OS08G0504000 N
OS09G0485600 Oryza sativa OS09G0485600 N
Pavir.Ba01731 Panicum virgatum Pavir.Ba01731 N
Pavir.Fa00506 Panicum virgatum Pavir.Fa00506 N
Pavir.Fb01879 Panicum virgatum Pavir.Fb01879 N
PGSC0003DMG400006808 Solanum tuberosum PGSC0003DMG400006808 N
PGSC0003DMG400007112 Solanum tuberosum PGSC0003DMG400007112 N
PGSC0003DMG400013609 Solanum tuberosum PGSC0003DMG400013609 N
PGSC0003DMG400030271 Solanum tuberosum PGSC0003DMG400030271 N
PGSC0003DMG400030803 Solanum tuberosum PGSC0003DMG400030803 N
PGSC0003DMG400046144 Solanum tuberosum PGSC0003DMG400046144 N
PK03705.1 Cannabis sativa PK03705.1 N
PK05257.1 Cannabis sativa PK05257.1 N
Pm000471 Prunus mume Pm000471 N
Pm001374 Prunus mume Pm001374 N
Pm025853 Prunus mume Pm025853 N
POPTR_0001s27490 Populus trichocarpa POPTR_0001s27490 N
POPTR_0002s09840 Populus trichocarpa POPTR_0002s09840 N
POPTR_0003s20400 Populus trichocarpa POPTR_0003s20400 N
POPTR_0004s19460 Populus trichocarpa POPTR_0004s19460 N
POPTR_0009s06700 Populus trichocarpa POPTR_0009s06700 N
POPTR_0009s14590 Populus trichocarpa POPTR_0009s14590 N
POPTR_0016s05310 Populus trichocarpa POPTR_0016s05310 N
PRUPE_ppa008185mg Prunus persica PRUPE_ppa008185mg N
PRUPE_ppa023619mg Prunus persica PRUPE_ppa023619mg N
PRUPE_ppa024429mg Prunus persica PRUPE_ppa024429mg N
SapurV1A.0009s0540 Salix purpurea SapurV1A.0009s0540 N
SapurV1A.0018s0090 Salix purpurea SapurV1A.0018s0090 N
SapurV1A.0027s0280 Salix purpurea SapurV1A.0027s0280 N
SapurV1A.0080s0360 Salix purpurea SapurV1A.0080s0360 N
SapurV1A.0111s0170 Salix purpurea SapurV1A.0111s0170 N
SapurV1A.0219s0040 Salix purpurea SapurV1A.0219s0040 N
SapurV1A.0445s0120 Salix purpurea SapurV1A.0445s0120 N
SapurV1A.0445s0140 Salix purpurea SapurV1A.0445s0140 N
SapurV1A.2210s0020 Salix purpurea SapurV1A.2210s0020 N
Sb02g028220 Sorghum bicolor Sb02g028220 N
Sb07g028010 Sorghum bicolor Sb07g028010 N
SELMODRAFT_110681 Selaginella moellendorffii SELMODRAFT_110681 N
SELMODRAFT_128378 Selaginella moellendorffii SELMODRAFT_128378 N
Si013819m.g Setaria italica Si013819m.g N
Si029897m.g Setaria italica Si029897m.g N
Solyc01g087050.2 Solanum lycopersicum Solyc01g087050.2 N
Solyc04g074320.1 Solanum lycopersicum Solyc04g074320.1 N
Solyc05g009770.1 Solanum lycopersicum Solyc05g009770.1 N
Solyc11g062060.1 Solanum lycopersicum Solyc11g062060.1 N
TCM_005892 Theobroma cacao TCM_005892 N
TCM_024788 Theobroma cacao TCM_024788 N
TCM_034881 Theobroma cacao TCM_034881 N
TCM_040610 Theobroma cacao TCM_040610 N
TCM_041441 Theobroma cacao TCM_041441 N
Thhalv10006035m.g Eutrema salsugineum Thhalv10006035m.g N
Thhalv10008125m.g Eutrema salsugineum Thhalv10008125m.g N
Traes_5BL_6888AE9CB Triticum aestivum Traes_5BL_6888AE9CB N
Traes_5DL_51643AC9F Triticum aestivum Traes_5DL_51643AC9F N
Traes_7AL_1070DBD71 Triticum aestivum Traes_7AL_1070DBD71 N
Traes_7AS_8054DC45D Triticum aestivum Traes_7AS_8054DC45D N
TRIUR3_23735 Triticum urartu TRIUR3_23735 N
TRIUR3_30490 Triticum urartu TRIUR3_30490 N
WIP3 Vitis vinifera VIT_06s0080g00270 N
NTT Vitis vinifera VIT_08s0007g08070 N
TT1 Vitis vinifera VIT_18s0001g05860 N